RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 INHBCP55103 352 aa18.89■□□□□ 0.61
CDKN3-209ENST00000556102 TYRO3Q06418 890 aa18.89■□□□□ 0.61
CDKN3-209ENST00000556102 DPYSQ14117 519 aa18.89■□□□□ 0.61
CDKN3-209ENST00000556102 LBRQ14739 615 aaKnown RBP18.89■□□□□ 0.61
CDKN3-209ENST00000556102 TMCO4Q5TGY1 634 aa18.89■□□□□ 0.61
CDKN3-209ENST00000556102 OGFOD3Q6PK18 319 aa18.89■□□□□ 0.61
CDKN3-209ENST00000556102 RAB11FIP2Q7L804 512 aa18.89■□□□□ 0.61
CDKN3-209ENST00000556102 ZNF571Q7Z3V5 609 aaPredicted RBP18.89■□□□□ 0.61
CDKN3-209ENST00000556102 TAF8Q7Z7C8 310 aa18.89■□□□□ 0.61
CDKN3-209ENST00000556102 ZNF605Q86T29 641 aa18.89■□□□□ 0.61
CDKN3-209ENST00000556102 FBXO39Q8N4B4 442 aa18.89■□□□□ 0.61
CDKN3-209ENST00000556102 TTC9Q92623 222 aa18.89■□□□□ 0.61
CDKN3-209ENST00000556102 TMEM74Q96NL1 305 aa18.89■□□□□ 0.61
CDKN3-209ENST00000556102 ZNF599Q96NL3 588 aa18.89■□□□□ 0.61
CDKN3-209ENST00000556102 LRRN3Q9H3W5 708 aa18.89■□□□□ 0.61
CDKN3-209ENST00000556102 HAUS4Q9H6D7 363 aa18.89■□□□□ 0.61
CDKN3-209ENST00000556102 CWC15Q9P013 229 aaKnown RBP18.89■□□□□ 0.61
CDKN3-209ENST00000556102 CNOT8Q9UFF9 292 aaKnown RBP18.89■□□□□ 0.61
CDKN3-209ENST00000556102 SCINQ9Y6U3 715 aa18.89■□□□□ 0.61
CDKN3-209ENST00000556102 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.88■□□□□ 0.61
CDKN3-209ENST00000556102 K7ENP7 123 aa18.88■□□□□ 0.61
CDKN3-209ENST00000556102 MBD3O95983 291 aa18.88■□□□□ 0.61
CDKN3-209ENST00000556102 FTLP02792 175 aaPredicted RBP18.88■□□□□ 0.61
CDKN3-209ENST00000556102 PLA2G2AP14555 144 aa18.88■□□□□ 0.61
CDKN3-209ENST00000556102 GLB1P16278 677 aa18.88■□□□□ 0.61
CDKN3-209ENST00000556102 CCKBRP32239 447 aa18.88■□□□□ 0.61
CDKN3-209ENST00000556102 UGT1A5P35504 534 aa18.88■□□□□ 0.61
CDKN3-209ENST00000556102 PRKCIP41743 596 aa18.88■□□□□ 0.61
CDKN3-209ENST00000556102 CLN3Q13286 438 aa18.88■□□□□ 0.61
CDKN3-209ENST00000556102 INO80CQ6PI98 192 aaPredicted RBP18.88■□□□□ 0.61
CDKN3-209ENST00000556102 CCNJLQ8IV13 435 aa18.88■□□□□ 0.61
CDKN3-209ENST00000556102 FAM46DQ8NEK8 389 aa18.88■□□□□ 0.61
CDKN3-209ENST00000556102 SPOCK2Q92563 424 aa18.88■□□□□ 0.61
CDKN3-209ENST00000556102 ZNF653Q96CK0 615 aa18.88■□□□□ 0.61
CDKN3-209ENST00000556102 NSMCE3Q96MG7 304 aa18.88■□□□□ 0.61
CDKN3-209ENST00000556102 FOXP3Q9BZS1 431 aa18.88■□□□□ 0.61
CDKN3-209ENST00000556102 NAT10Q9H0A0 1025 aaKnown RBP18.88■□□□□ 0.61
CDKN3-209ENST00000556102 WDR26Q9H7D7 661 aa18.88■□□□□ 0.61
CDKN3-209ENST00000556102 ZWILCHQ9H900 591 aa18.88■□□□□ 0.61
CDKN3-209ENST00000556102 MRPL40Q9NQ50 206 aaKnown RBP18.88■□□□□ 0.61
CDKN3-209ENST00000556102 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.88■□□□□ 0.61
CDKN3-209ENST00000556102 AIPL1Q9NZN9 384 aa18.88■□□□□ 0.61
CDKN3-209ENST00000556102 B4GALT6Q9UBX8 382 aa18.88■□□□□ 0.61
CDKN3-209ENST00000556102 APPL1Q9UKG1 709 aa18.88■□□□□ 0.61
CDKN3-209ENST00000556102 PCDHGA7Q9Y5G6 932 aa18.88■□□□□ 0.61
CDKN3-209ENST00000556102 A0A1W2PQ67 120 aa18.87■□□□□ 0.61
CDKN3-209ENST00000556102 H3BRJ5 948 aa18.87■□□□□ 0.61
CDKN3-209ENST00000556102 NOBOXO60393 691 aa18.87■□□□□ 0.61
CDKN3-209ENST00000556102 PNLIPP16233 465 aa18.87■□□□□ 0.61
CDKN3-209ENST00000556102 PCK1P35558 622 aa18.87■□□□□ 0.61
CDKN3-209ENST00000556102 HSPA9P38646 679 aaKnown RBP18.87■□□□□ 0.61
CDKN3-209ENST00000556102 SLC10A7Q0GE19 358 aa18.87■□□□□ 0.61
CDKN3-209ENST00000556102 ACOX1Q15067 660 aa18.87■□□□□ 0.61
CDKN3-209ENST00000556102 C14orf28Q4W4Y0 310 aa18.87■□□□□ 0.61
CDKN3-209ENST00000556102 CERCAMQ5T4B2 595 aa18.87■□□□□ 0.61
CDKN3-209ENST00000556102 E4F1Q66K89 784 aaPredicted RBP18.87■□□□□ 0.61
CDKN3-209ENST00000556102 PNCKQ6P2M8 343 aa18.87■□□□□ 0.61
CDKN3-209ENST00000556102 CCDC81Q6ZN84 652 aa18.87■□□□□ 0.61
CDKN3-209ENST00000556102 TP53INP2Q8IXH6 220 aa18.87■□□□□ 0.61
CDKN3-209ENST00000556102 TRIM11Q96F44 468 aa18.87■□□□□ 0.61
CDKN3-209ENST00000556102 TMEM168Q9H0V1 697 aa18.87■□□□□ 0.61
CDKN3-209ENST00000556102 CYP4F12Q9HCS2 524 aa18.87■□□□□ 0.61
CDKN3-209ENST00000556102 A8MX80 341 aa18.86■□□□□ 0.61
CDKN3-209ENST00000556102 PDE2AO00408 941 aaPredicted RBP18.86■□□□□ 0.61
CDKN3-209ENST00000556102 DDX3XO00571 662 aaKnown RBP eCLIP18.86■□□□□ 0.615e-7■■■□□ 16.9
CDKN3-209ENST00000556102 HTRA2O43464 458 aaPredicted RBP18.86■□□□□ 0.61
CDKN3-209ENST00000556102 SOCS5O75159 536 aa18.86■□□□□ 0.61
CDKN3-209ENST00000556102 MYBL1P10243 752 aa18.86■□□□□ 0.61
CDKN3-209ENST00000556102 SLC5A2P31639 672 aa18.86■□□□□ 0.61
CDKN3-209ENST00000556102 ARL4AP40617 200 aa18.86■□□□□ 0.61
CDKN3-209ENST00000556102 KLHL30Q0D2K2 578 aa18.86■□□□□ 0.61
CDKN3-209ENST00000556102 ZNF235Q14590 738 aa18.86■□□□□ 0.61
CDKN3-209ENST00000556102 TSR1Q2NL82 804 aaKnown RBP18.86■□□□□ 0.61
CDKN3-209ENST00000556102 ZSCAN23Q3MJ62 389 aa18.86■□□□□ 0.61
CDKN3-209ENST00000556102 ANO6Q4KMQ2 910 aa18.86■□□□□ 0.61
CDKN3-209ENST00000556102 FILIP1LQ4L180 1135 aa18.86■□□□□ 0.61
CDKN3-209ENST00000556102 PELI3Q8N2H9 469 aa18.86■□□□□ 0.61
CDKN3-209ENST00000556102 Q8N9G6 341 aaPredicted RBP18.86■□□□□ 0.61
CDKN3-209ENST00000556102 NUS1Q96E22 293 aa18.86■□□□□ 0.61
CDKN3-209ENST00000556102 COQ10AQ96MF6 247 aa18.86■□□□□ 0.61
CDKN3-209ENST00000556102 BPIFA3Q9BQP9 254 aa18.86■□□□□ 0.61
CDKN3-209ENST00000556102 LGR4Q9BXB1 951 aa18.86■□□□□ 0.61
CDKN3-209ENST00000556102 MRPL47Q9HD33 250 aaKnown RBP18.86■□□□□ 0.61
CDKN3-209ENST00000556102 KCTD5Q9NXV2 234 aa18.86■□□□□ 0.61
CDKN3-209ENST00000556102 MOSPD1Q9UJG1 213 aa18.86■□□□□ 0.61
CDKN3-209ENST00000556102 ACSL6Q9UKU0 697 aa18.86■□□□□ 0.61
CDKN3-209ENST00000556102 ATXN7L1Q9ULK2 861 aaPredicted RBP18.86■□□□□ 0.61
CDKN3-209ENST00000556102 A0A1W2PQC6 194 aa18.85■□□□□ 0.61
CDKN3-209ENST00000556102 PRSS38A1L453 326 aa18.85■□□□□ 0.61
CDKN3-209ENST00000556102 SMTNL1A8MU46 457 aa18.85■□□□□ 0.61
CDKN3-209ENST00000556102 B4DGG1 531 aa18.85■□□□□ 0.61
CDKN3-209ENST00000556102 CPP00450 1065 aa18.85■□□□□ 0.61
CDKN3-209ENST00000556102 MYCLP1P12525 358 aaPredicted RBP18.85■□□□□ 0.61
CDKN3-209ENST00000556102 CR2P20023 1033 aa18.85■□□□□ 0.61
CDKN3-209ENST00000556102 HLTFQ14527 1009 aaKnown RBP eCLIP18.85■□□□□ 0.61
CDKN3-209ENST00000556102 CNGA3Q16281 694 aa18.85■□□□□ 0.61
CDKN3-209ENST00000556102 DPYSL2Q16555 572 aa18.85■□□□□ 0.61
CDKN3-209ENST00000556102 SPECC1LQ69YQ0 1117 aa18.85■□□□□ 0.61
CDKN3-209ENST00000556102 TMCO3Q6UWJ1 677 aa18.85■□□□□ 0.61
CDKN3-209ENST00000556102 SPRED1Q7Z699 444 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms