RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 CNTN1Q12860 1018 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 FGL2Q14314 439 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 RFTN1Q14699 578 aaPredicted RBP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 POLD3Q15054 466 aaPredicted RBP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 PDK2Q15119 407 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 SF3A2Q15428 464 aaKnown RBP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ZRSR2Q15696 482 aaKnown RBP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 DUOXA1Q1HG43 343 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ZNF423Q2M1K9 1284 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ATP13A4Q4VNC1 1196 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ODF2Q5BJF6 829 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 CARD16Q5EG05 197 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 DCAF12L1Q5VU92 463 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 LYSMD4Q5XG99 296 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 OR52E8Q6IFG1 317 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 DPY19L3Q6ZPD9 716 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ZSWIM9Q86XI8 627 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 CCDC117Q8IWD4 279 aaPredicted RBP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 RHOT2Q8IXI1 618 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 TMEFF1Q8IYR6 380 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 LZTR1Q8N653 840 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 PLD5Q8N7P1 536 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 OR2T34Q8NGX1 318 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 CEP76Q8TAP6 659 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 NETO1Q8TDF5 533 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 BIRC7Q96CA5 298 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 LENG8Q96PV6 779 aaPredicted RBP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 NDNQ99608 321 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 MGME1Q9BQP7 344 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 FAM129AQ9BZQ8 928 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 PHACTR1Q9C0D0 580 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 MUC3BQ9H195 1237 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 VCXQ9H320 206 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 CNOT10Q9H9A5 744 aaKnown RBP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 PREBQ9HCU5 417 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ATP13A1Q9HD20 1204 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 SMARCAL1Q9NZC9 954 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 IL36AQ9UHA7 158 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 GMEB2Q9UKD1 530 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 FCF1Q9Y324 198 aaKnown RBP3.95□□□□□ -1.78
LINC00648-202ENST00000555985 PCDHA13Q9Y5I0 950 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 GMEB1Q9Y692 573 aa3.95□□□□□ -1.78
LINC00648-202ENST00000555985 ABCA7Q8IZY2 2146 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 A0A1W2PPC4 97 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 FZD6O60353 706 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 GDF9O60383 454 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 CBFA2T3O75081 653 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 LEFTY1O75610 366 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 UBOX5O94941 541 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 SEMA4FO95754 770 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 MMP2P08253 660 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 PDHA1P08559 390 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 DESP17661 470 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 KDELR1P24390 212 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 CTNNA2P26232 953 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 CD27P26842 260 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 NUDT1P36639 197 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 CDKN2BP42772 138 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 SLC1A1P43005 524 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 CTSKP43235 329 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 PEX5P50542 639 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 GEMIN4P57678 1058 aaKnown RBP3.94□□□□□ -1.78
LINC00648-202ENST00000555985 TPI1P60174 286 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 ST8SIA6P61647 398 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 MPP3Q13368 585 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 UAP1Q16222 522 aaPredicted RBP3.94□□□□□ -1.78
LINC00648-202ENST00000555985 SMTNL2Q2TAL5 461 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 MYLK3Q32MK0 819 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 GALNTL6Q49A17 601 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 TMEM52BQ4KMG9 183 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 TCEAL6Q6IPX3 200 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 RETSATQ6NUM9 610 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 PRR23BQ6ZRT6 265 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 RINLQ6ZS11 566 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 PARS2Q7L3T8 475 aaKnown RBP3.94□□□□□ -1.78
LINC00648-202ENST00000555985 RABEPKQ7Z6M1 372 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 LRRC49Q8IUZ0 686 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 MMAAQ8IVH4 418 aaKnown RBP3.94□□□□□ -1.78
LINC00648-202ENST00000555985 EIF1ADQ8N9N8 165 aaKnown RBP3.94□□□□□ -1.78
LINC00648-202ENST00000555985 OR2AP1Q8NGE2 309 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 OR2W6PQ8NHA6 318 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 TPCN2Q8NHX9 752 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 PIP4K2CQ8TBX8 421 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 OR8D1Q8WZ84 308 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 FOXJ1Q92949 421 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 TCEAL3Q969E4 200 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 KLHL29Q96CT2 875 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 PSKH2Q96QS6 385 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 TUBGCP5Q96RT8 1024 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 KLF6Q99612 283 aaPredicted RBP3.94□□□□□ -1.78
LINC00648-202ENST00000555985 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.94□□□□□ -1.78
LINC00648-202ENST00000555985 DHX35Q9H5Z1 703 aaKnown RBP3.94□□□□□ -1.78
LINC00648-202ENST00000555985 RNF14Q9UBS8 474 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 CTNNAL1Q9UBT7 734 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 PCSK1NQ9UHG2 260 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 NOVA2Q9UNW9 492 aaKnown RBP3.94□□□□□ -1.78
LINC00648-202ENST00000555985 ATP8A1Q9Y2Q0 1164 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 PCDHGB2Q9Y5G2 931 aa3.94□□□□□ -1.78
LINC00648-202ENST00000555985 FADS3Q9Y5Q0 445 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms