RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 RNF219Q5W0B1 726 aaPredicted RBP24.34■■□□□ 1.49
TMEM260-207ENST00000555497 PIWIL4Q7Z3Z4 852 aaKnown RBP24.34■■□□□ 1.49
TMEM260-207ENST00000555497 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.34■■□□□ 1.49
TMEM260-207ENST00000555497 GIMAP7Q8NHV1 300 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 PEX13Q92968 403 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 SLC22A12Q96S37 553 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 NCKIPSDQ9NZQ3 722 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 VTI1BQ9UEU0 232 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 TBC1D30Q9Y2I9 924 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 A0A1B0GVM2 712 aa24.33■■□□□ 1.49
TMEM260-207ENST00000555497 TCAF2A6NFQ2 919 aa24.33■■□□□ 1.49
TMEM260-207ENST00000555497 PARNO95453 639 aaKnown RBP24.33■■□□□ 1.49
TMEM260-207ENST00000555497 F11P03951 625 aa24.33■■□□□ 1.49
TMEM260-207ENST00000555497 ITGAXP20702 1163 aa24.33■■□□□ 1.49
TMEM260-207ENST00000555497 SERPINB5P36952 375 aa24.33■■□□□ 1.49
TMEM260-207ENST00000555497 SESN3P58005 492 aa24.33■■□□□ 1.49
TMEM260-207ENST00000555497 ACAP2Q15057 778 aa24.33■■□□□ 1.49
TMEM260-207ENST00000555497 FAM219BQ5XKK7 198 aa24.33■■□□□ 1.49
TMEM260-207ENST00000555497 TPGS2Q68CL5 300 aa24.33■■□□□ 1.49
TMEM260-207ENST00000555497 CHST9Q7L1S5 443 aa24.33■■□□□ 1.49
TMEM260-207ENST00000555497 SLC39A11Q8N1S5 342 aa24.33■■□□□ 1.49
TMEM260-207ENST00000555497 NRG4Q8WWG1 115 aa24.33■■□□□ 1.49
TMEM260-207ENST00000555497 CDKN2AIPNLQ96HQ2 116 aa24.33■■□□□ 1.49
TMEM260-207ENST00000555497 ZBED2Q9BTP6 218 aa24.33■■□□□ 1.49
TMEM260-207ENST00000555497 IPO13O94829 963 aaKnown RBP24.33■■□□□ 1.48
TMEM260-207ENST00000555497 SORBS2O94875 1100 aaKnown RBP24.33■■□□□ 1.48
TMEM260-207ENST00000555497 CD160O95971 181 aa24.33■■□□□ 1.48
TMEM260-207ENST00000555497 FDXRP22570 491 aa24.33■■□□□ 1.48
TMEM260-207ENST00000555497 PRDX6P30041 224 aa24.33■■□□□ 1.48
TMEM260-207ENST00000555497 TWF1Q12792 350 aa24.33■■□□□ 1.48
TMEM260-207ENST00000555497 TAF12Q16514 161 aa24.33■■□□□ 1.48
TMEM260-207ENST00000555497 SH2D4BQ5SQS7 431 aa24.33■■□□□ 1.48
TMEM260-207ENST00000555497 ISCA2Q86U28 154 aa24.33■■□□□ 1.48
TMEM260-207ENST00000555497 MDGA1Q8NFP4 955 aa24.33■■□□□ 1.48
TMEM260-207ENST00000555497 OR4L1Q8NH43 312 aa24.33■■□□□ 1.48
TMEM260-207ENST00000555497 SCG3Q8WXD2 468 aaKnown RBP24.33■■□□□ 1.48
TMEM260-207ENST00000555497 PHF21BQ96EK2 531 aa24.33■■□□□ 1.48
TMEM260-207ENST00000555497 TRMT2BQ96GJ1 504 aaKnown RBP24.33■■□□□ 1.48
TMEM260-207ENST00000555497 ZFRQ96KR1 1074 aaKnown RBP24.33■■□□□ 1.48
TMEM260-207ENST00000555497 ZNF385DQ9H6B1 395 aa24.33■■□□□ 1.48
TMEM260-207ENST00000555497 ALG9Q9H6U8 611 aa24.33■■□□□ 1.48
TMEM260-207ENST00000555497 HSFX1Q9UBD0 423 aa24.33■■□□□ 1.48
TMEM260-207ENST00000555497 SSX2IPQ9Y2D8 614 aa24.33■■□□□ 1.48
TMEM260-207ENST00000555497 MKI67P46013 3256 aaKnown RBP24.32■■□□□ 1.48
TMEM260-207ENST00000555497 RBP1P09455 135 aa24.32■■□□□ 1.48
TMEM260-207ENST00000555497 ZNF140P52738 457 aaPredicted RBP24.32■■□□□ 1.48
TMEM260-207ENST00000555497 ARF5P84085 180 aa24.32■■□□□ 1.48
TMEM260-207ENST00000555497 CUL3Q13618 768 aa24.32■■□□□ 1.48
TMEM260-207ENST00000555497 FAM45BPQ6NSW5 357 aa24.32■■□□□ 1.48
TMEM260-207ENST00000555497 KLC3Q6P597 504 aa24.32■■□□□ 1.48
TMEM260-207ENST00000555497 CNKSR3Q6P9H4 555 aa24.32■■□□□ 1.48
TMEM260-207ENST00000555497 LINGO4Q6UY18 593 aa24.32■■□□□ 1.48
TMEM260-207ENST00000555497 DNAJB7Q7Z6W7 309 aaPredicted RBP24.32■■□□□ 1.48
TMEM260-207ENST00000555497 SETD3Q86TU7 594 aaPredicted RBP24.32■■□□□ 1.48
TMEM260-207ENST00000555497 FAM45AQ8TCE6 357 aa24.32■■□□□ 1.48
TMEM260-207ENST00000555497 PTERQ96BW5 349 aa24.32■■□□□ 1.48
TMEM260-207ENST00000555497 CNDP1Q96KN2 507 aa24.32■■□□□ 1.48
TMEM260-207ENST00000555497 CATSPERZQ9NTU4 200 aa24.32■■□□□ 1.48
TMEM260-207ENST00000555497 PCDHGC4Q9Y5F7 938 aa24.32■■□□□ 1.48
TMEM260-207ENST00000555497 F8W8V4 182 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 SLCO1B7G3V0H7 640 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 SNAP91O60641 907 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 PIK3R1P27986 724 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 ACTR3P61158 418 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 LAMB3Q13751 1172 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 PTPRRQ15256 657 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 TRMT5Q32P41 509 aaKnown RBP24.31■■□□□ 1.48
TMEM260-207ENST00000555497 PPM1LQ5SGD2 360 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 STMN2Q93045 179 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 RMDN1Q96DB5 314 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 SCUBE2Q9NQ36 999 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 RIMKLBQ9ULI2 386 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 CDYLQ9Y232 598 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 LRRC42Q9Y546 428 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 WASF2Q9Y6W5 498 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 CIB2O75838 187 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 ZXDBP98169 803 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 SULT2A1Q06520 285 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 MRNIPQ6NTE8 343 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 TOP1MTQ969P6 601 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 ZNF689Q96CS4 500 aaPredicted RBP24.31■■□□□ 1.48
TMEM260-207ENST00000555497 MARK4Q96L34 752 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 CATSPER2Q96P56 530 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 TDRD1Q9BXT4 1180 aaKnown RBP24.31■■□□□ 1.48
TMEM260-207ENST00000555497 MUC3BQ9H195 1237 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 ZNF334Q9HCZ1 680 aaPredicted RBP24.31■■□□□ 1.48
TMEM260-207ENST00000555497 NLE1Q9NVX2 485 aaPredicted RBP24.31■■□□□ 1.48
TMEM260-207ENST00000555497 TBX21Q9UL17 535 aa24.31■■□□□ 1.48
TMEM260-207ENST00000555497 SP100P23497 879 aaPredicted RBP24.3■■□□□ 1.48
TMEM260-207ENST00000555497 RFTN1Q14699 578 aaPredicted RBP24.3■■□□□ 1.48
TMEM260-207ENST00000555497 C1orf146Q5VVC0 180 aa24.3■■□□□ 1.48
TMEM260-207ENST00000555497 PGM2L1Q6PCE3 622 aa24.3■■□□□ 1.48
TMEM260-207ENST00000555497 ACAD11Q709F0 780 aa24.3■■□□□ 1.48
TMEM260-207ENST00000555497 EFCAB3Q8N7B9 438 aa24.3■■□□□ 1.48
TMEM260-207ENST00000555497 OR4K2Q8NGD2 314 aa24.3■■□□□ 1.48
TMEM260-207ENST00000555497 FAM136AQ96C01 138 aa24.3■■□□□ 1.48
TMEM260-207ENST00000555497 TMEM169Q96HH4 297 aa24.3■■□□□ 1.48
TMEM260-207ENST00000555497 ZNF558Q96NG5 402 aa24.3■■□□□ 1.48
TMEM260-207ENST00000555497 GTSE1Q9NYZ3 720 aa24.3■■□□□ 1.48
TMEM260-207ENST00000555497 STX18Q9P2W9 335 aaKnown RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms