RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 CSF2P04141 144 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 MYF5P13349 255 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 NME1P15531 152 aaKnown RBP13.71□□□□□ -0.21
SNX6-203ENST00000555416 ZFXP17010 805 aaPredicted RBP13.71□□□□□ -0.21
SNX6-203ENST00000555416 HNF1BP35680 557 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 CD86P42081 329 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 NAP1L1P55209 391 aaKnown RBP13.71□□□□□ -0.21
SNX6-203ENST00000555416 CLDN6P56747 220 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 PDK1Q15118 436 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 PRKD1Q15139 912 aaPredicted RBP13.71□□□□□ -0.21
SNX6-203ENST00000555416 CCDC157Q569K6 752 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 ODF2Q5BJF6 829 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 TFDP3Q5H9I0 405 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 DENND2CQ68D51 928 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 PARGQ86W56 976 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 RCOR2Q8IZ40 523 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 EXD1Q8NHP7 514 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 FAM174AQ8TBP5 190 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 SCRN2Q96FV2 425 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 CNDP2Q96KP4 475 aaKnown RBP13.71□□□□□ -0.21
SNX6-203ENST00000555416 ZNF830Q96NB3 372 aaPredicted RBP13.71□□□□□ -0.21
SNX6-203ENST00000555416 CNTNAP3BQ96NU0 1288 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 C1QTNF7Q9BXJ2 289 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 TDRD1Q9BXT4 1180 aaKnown RBP13.71□□□□□ -0.21
SNX6-203ENST00000555416 CNTNAP3Q9BZ76 1288 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 BRD8Q9H0E9 1235 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 SEPT10Q9P0V9 454 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 FTSJ1Q9UET6 329 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 AMACRQ9UHK6 382 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 PHTF1Q9UMS5 762 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 PPIL1Q9Y3C6 166 aa13.71□□□□□ -0.21
SNX6-203ENST00000555416 CFAP69A5D8W1 941 aa13.7□□□□□ -0.22
SNX6-203ENST00000555416 ENC1O14682 589 aa13.7□□□□□ -0.22
SNX6-203ENST00000555416 GCATO75600 419 aa13.7□□□□□ -0.22
SNX6-203ENST00000555416 LDOC1O95751 146 aaPredicted RBP13.7□□□□□ -0.22
SNX6-203ENST00000555416 CELA2BP08218 269 aaPredicted RBP13.7□□□□□ -0.22
SNX6-203ENST00000555416 JUNDP17535 347 aa13.7□□□□□ -0.22
SNX6-203ENST00000555416 PTPN3P26045 913 aa13.7□□□□□ -0.22
SNX6-203ENST00000555416 CTNNA2P26232 953 aa13.7□□□□□ -0.22
SNX6-203ENST00000555416 ETV3P41162 512 aa13.7□□□□□ -0.22
SNX6-203ENST00000555416 WASHC5Q12768 1159 aa13.7□□□□□ -0.22
SNX6-203ENST00000555416 TFDP2Q14188 446 aa13.7□□□□□ -0.22
SNX6-203ENST00000555416 ACOX1Q15067 660 aa13.7□□□□□ -0.22
SNX6-203ENST00000555416 PROX2Q3B8N5 592 aa13.7□□□□□ -0.22
SNX6-203ENST00000555416 CRTC1Q6UUV9 634 aa13.7□□□□□ -0.22
SNX6-203ENST00000555416 Q6ZVL8 140 aa13.7□□□□□ -0.22
SNX6-203ENST00000555416 NT5DC3Q86UY8 548 aa13.7□□□□□ -0.22
SNX6-203ENST00000555416 CCDC50Q8IVM0 306 aa13.7□□□□□ -0.22
SNX6-203ENST00000555416 ZNF548Q8NEK5 533 aaPredicted RBP13.7□□□□□ -0.22
SNX6-203ENST00000555416 KIAA1524Q8TCG1 905 aa13.7□□□□□ -0.22
SNX6-203ENST00000555416 ADAMTS14Q8WXS8 1223 aa13.7□□□□□ -0.22
SNX6-203ENST00000555416 TSACCQ96A04 125 aaPredicted RBP13.7□□□□□ -0.22
SNX6-203ENST00000555416 IFT43Q96FT9 208 aa13.7□□□□□ -0.22
SNX6-203ENST00000555416 AGAP3Q96P47 875 aa13.7□□□□□ -0.22
SNX6-203ENST00000555416 RBM15Q96T37 977 aaKnown RBP eCLIP13.7□□□□□ -0.22
SNX6-203ENST00000555416 APOOQ9BUR5 198 aa13.7□□□□□ -0.22
SNX6-203ENST00000555416 LGR4Q9BXB1 951 aa13.7□□□□□ -0.22
SNX6-203ENST00000555416 TMEM121BQ9BXQ6 578 aaPredicted RBP13.7□□□□□ -0.22
SNX6-203ENST00000555416 PACSIN2Q9UNF0 486 aaPredicted RBP13.7□□□□□ -0.22
SNX6-203ENST00000555416 LY6G6EA0A0G2JKS1 128 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 A0A0J9YYE9 177 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 PPP1R12AO14974 1030 aaPredicted RBP13.69□□□□□ -0.22
SNX6-203ENST00000555416 FTCDO95954 541 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 TRBC1P01850 177 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 PYGMP11217 842 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 TGM2P21980 687 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 CD68P34810 354 aaPredicted RBP13.69□□□□□ -0.22
SNX6-203ENST00000555416 THOP1P52888 689 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 YPEL5P62699 121 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 MTM1Q13496 603 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 C1orf61Q13536 156 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 TCEA2Q15560 299 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 PPP2R5EQ16537 467 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 CDKN3Q16667 212 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 QPCTQ16769 361 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 ALG11Q2TAA5 492 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 INAVAQ3KP66 663 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 MACC1Q6ZN28 852 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 BBS12Q6ZW61 710 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 KDELC2Q7Z4H8 507 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 TECPR1Q7Z6L1 1165 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 ZC3H18Q86VM9 953 aaKnown RBP13.69□□□□□ -0.22
SNX6-203ENST00000555416 PHACTR4Q8IZ21 702 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 LPCAT1Q8NF37 534 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 OR4C6Q8NH72 309 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 SPATA22Q8NHS9 363 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 TADA1Q96BN2 335 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 IMP4Q96G21 291 aaKnown RBP13.69□□□□□ -0.22
SNX6-203ENST00000555416 RBM41Q96IZ5 413 aaKnown RBP13.69□□□□□ -0.22
SNX6-203ENST00000555416 TRIB3Q96RU7 358 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 FAM118BQ9BPY3 351 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 CLPBQ9H078 707 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 PCDH9Q9HC56 1237 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 APOBEC2Q9Y235 224 aaKnown RBP13.69□□□□□ -0.22
SNX6-203ENST00000555416 SSUH2Q9Y2M2 353 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 ADGRG1Q9Y653 693 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 CAPN6Q9Y6Q1 641 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 U3KQA8 63 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 PTPRBP23467 1997 aa13.69□□□□□ -0.22
SNX6-203ENST00000555416 LRP4O75096 1905 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms