RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 NEK3P51956 506 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 PRKCZQ05513 592 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 BNIP2Q12982 314 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 SQLEQ14534 574 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 PTPN21Q16825 1174 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 RFX4Q33E94 735 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 TIMM50Q3ZCQ8 353 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 VARS2Q5ST30 1063 aaKnown RBP8.44□□□□□ -1.06
LINC00641-201ENST00000555379 TRIM40Q6P9F5 258 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 PTAR1Q7Z6K3 402 aaPredicted RBP8.44□□□□□ -1.06
LINC00641-201ENST00000555379 TFAP2DQ7Z6R9 452 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 EID3Q8N140 333 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 AHI1Q8N157 1196 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 SH2D3CQ8N5H7 860 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 CLEC4DQ8WXI8 215 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 BRI3BPQ8WY22 251 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 NELL2Q99435 816 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 SLC25A51Q9H1U9 297 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 GLOD4Q9HC38 313 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 WDR6Q9NNW5 1121 aaKnown RBP8.44□□□□□ -1.06
LINC00641-201ENST00000555379 TCF7L2Q9NQB0 619 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 TELO2Q9Y4R8 837 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 F5H423 210 aaPredicted RBP8.44□□□□□ -1.06
LINC00641-201ENST00000555379 DDX3XO00571 662 aaKnown RBP eCLIP8.44□□□□□ -1.06
LINC00641-201ENST00000555379 UBXN7O94888 489 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 VIPP01282 170 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 TBX2Q13207 712 aaPredicted RBP8.44□□□□□ -1.06
LINC00641-201ENST00000555379 HNRNPDQ14103 355 aaKnown RBP8.44□□□□□ -1.06
LINC00641-201ENST00000555379 NCCRP1Q6ZVX7 275 aaPredicted RBP8.44□□□□□ -1.06
LINC00641-201ENST00000555379 SYT12Q8IV01 421 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 SCUBE3Q8IX30 993 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 PCDH20Q8N6Y1 951 aaKnown RBP8.44□□□□□ -1.06
LINC00641-201ENST00000555379 ZSCAN18Q8TBC5 510 aaPredicted RBP8.44□□□□□ -1.06
LINC00641-201ENST00000555379 COPS5Q92905 334 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 RAB7BQ96AH8 199 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 NSMCE2Q96MF7 247 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 RNF145Q96MT1 663 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 PAIP1Q9H074 479 aaKnown RBP8.44□□□□□ -1.06
LINC00641-201ENST00000555379 KCNK4Q9NYG8 393 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 SLC9A8Q9Y2E8 581 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 A0A0U1RQF3 1178 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 SH3D21A4FU49 640 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 RARAP10276 462 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 OXTRP30559 389 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 IST1P53990 364 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 DDX39BQ13838 428 aaKnown RBP8.44□□□□□ -1.06
LINC00641-201ENST00000555379 SPATA19Q7Z5L4 167 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 C4orf33Q8N1A6 199 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 HDDC3Q8N4P3 179 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 EMC1Q8N766 993 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 NELL1Q92832 810 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 CERS2Q96G23 380 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 TEFMQ96QE5 360 aaKnown RBP8.44□□□□□ -1.06
LINC00641-201ENST00000555379 ZNF607Q96SK3 696 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 PNKPQ96T60 521 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 CHID1Q9BWS9 393 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 GPATCH2LQ9NWQ4 482 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 GIN1Q9NXP7 522 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 CFL2Q9Y281 166 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 TDRKHQ9Y2W6 561 aaKnown RBP8.44□□□□□ -1.06
LINC00641-201ENST00000555379 ZNF780BQ9Y6R6 833 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 KCPQ6ZWJ8 1503 aa8.44□□□□□ -1.06
LINC00641-201ENST00000555379 SLC38A8A6NNN8 435 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 VSTM5A8MXK1 200 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 PRMT5O14744 637 aaPredicted RBP8.43□□□□□ -1.06
LINC00641-201ENST00000555379 ADH1BP00325 375 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 IFNA16P05015 189 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 ENDOUP21128 410 aaKnown RBP8.43□□□□□ -1.06
LINC00641-201ENST00000555379 ATP5A1P25705 553 aaKnown RBP8.43□□□□□ -1.06
LINC00641-201ENST00000555379 SGO1Q5FBB7 561 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 TCHHL1Q5QJ38 904 aaPredicted RBP8.43□□□□□ -1.06
LINC00641-201ENST00000555379 BRAT1Q6PJG6 821 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 MAMDC4Q6UXC1 1216 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 IKBIPQ70UQ0 350 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 ARID3BQ8IVW6 561 aaPredicted RBP8.43□□□□□ -1.06
LINC00641-201ENST00000555379 KYQ8NBH2 561 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 HERVK_113Q902F9 699 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 PRCCQ92733 491 aaPredicted RBP8.43□□□□□ -1.06
LINC00641-201ENST00000555379 REXO5Q96IC2 774 aaKnown RBP8.43□□□□□ -1.06
LINC00641-201ENST00000555379 SFXN1Q9H9B4 322 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 HMG20AQ9NP66 347 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 INTS10Q9NVR2 710 aaKnown RBP8.43□□□□□ -1.06
LINC00641-201ENST00000555379 ZNF214Q9UL59 606 aaPredicted RBP8.43□□□□□ -1.06
LINC00641-201ENST00000555379 VPS4AQ9UN37 437 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 DUSP12Q9UNI6 340 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 PLCL2Q9UPR0 1127 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 EDDM13A0A1B0GTR0 161 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 B2RBV5 119 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 BTN3A1O00481 513 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 TGDSO95455 350 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 ADRB2P07550 413 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 GSCP56915 257 aaPredicted RBP8.43□□□□□ -1.06
LINC00641-201ENST00000555379 STXBP1P61764 594 aaKnown RBP8.43□□□□□ -1.06
LINC00641-201ENST00000555379 FOXD4Q12950 439 aaPredicted RBP8.43□□□□□ -1.06
LINC00641-201ENST00000555379 POU6F1Q14863 301 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 VPS26BQ4G0F5 336 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 MFSD7Q6UXD7 560 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 AKAP14Q86UN6 197 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 REXO1L1PQ8IX06 675 aa8.43□□□□□ -1.06
LINC00641-201ENST00000555379 OR52L1Q8NGH7 329 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms