RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 CPEB1Q9BZB8 566 aaKnown RBP6.98□□□□□ -1.29
ATXN3-224ENST00000554040 CLPBQ9H078 707 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 CDH19Q9H159 772 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 TCEAL2Q9H3H9 227 aaPredicted RBP6.98□□□□□ -1.29
ATXN3-224ENST00000554040 DYRK4Q9NR20 520 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 GULP1Q9UBP9 304 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 APOBEC3BQ9UH17 382 aaKnown RBP6.98□□□□□ -1.29
ATXN3-224ENST00000554040 AKAP9Q99996 3911 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 TRPM6Q9BX84 2022 aa6.98□□□□□ -1.29
ATXN3-224ENST00000554040 A1L4Q6 167 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 ZNF891A8MT65 544 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-224ENST00000554040 AGRPO00253 132 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 KPNA3O00505 521 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-224ENST00000554040 FPGTO14772 594 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 EIF5BO60841 1220 aaKnown RBP6.97□□□□□ -1.29
ATXN3-224ENST00000554040 SEMA7AO75326 666 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 VPS4BO75351 444 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 RNF224P0DH78 156 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 LCP1P13796 627 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 TSHRP16473 764 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 TACR2P21452 398 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 DCTP40126 519 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 UQCRFS1P47985 274 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 NUCB2P80303 420 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 BST2Q10589 180 aaKnown RBP6.97□□□□□ -1.29
ATXN3-224ENST00000554040 GOLGA7BQ2TAP0 167 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 LRRK1Q38SD2 2015 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 KRTAP19-4Q3LI73 84 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 LACTB2Q53H82 288 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-224ENST00000554040 CAPRIN2Q6IMN6 1127 aaKnown RBP6.97□□□□□ -1.29
ATXN3-224ENST00000554040 KIAA1161Q6NSJ0 714 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 LVRNQ6Q4G3 990 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 LCNL1Q6ZST4 164 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 SYDE1Q6ZW31 735 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-224ENST00000554040 UNC13DQ70J99 1090 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 PHACTR4Q8IZ21 702 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 RBFAQ8N0V3 343 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 SH2D3CQ8N5H7 860 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 OR6C4Q8NGE1 309 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 IRGQQ8WZA9 623 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 ALG14Q96F25 216 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 KLF6Q99612 283 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-224ENST00000554040 LRRC61Q9BV99 259 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 SLC13A1Q9BZW2 595 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 SLC39A2Q9NP94 309 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 CISHQ9NSE2 258 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 SLAMF8Q9P0V8 285 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 XPO7Q9UIA9 1087 aaKnown RBP6.97□□□□□ -1.29
ATXN3-224ENST00000554040 SLC25A13Q9UJS0 675 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 TSPAN16Q9UKR8 245 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 PNMA8BQ9ULN7 279 aaPredicted RBP6.97□□□□□ -1.29
ATXN3-224ENST00000554040 VPS4AQ9UN37 437 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 NAALADL1Q9UQQ1 740 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 TLR6Q9Y2C9 796 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 NAV3Q8IVL0 2385 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 HIVEP3Q5T1R4 2406 aa6.97□□□□□ -1.29
ATXN3-224ENST00000554040 RNF103O00237 685 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 SPTLC2O15270 562 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 NKX2-8O15522 239 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 DDAH2O95865 285 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 MOCS2O96007 188 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-224ENST00000554040 MT-CO1P00395 513 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 LTFP02788 710 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 FYNP06241 537 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 PGRP06401 933 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 LIFP15018 202 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 GNLYP22749 145 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 RECQLP46063 649 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-224ENST00000554040 GCLMP48507 274 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 VAMP7P51809 220 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 SGCGQ13326 291 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 PTK2BQ14289 1009 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 FAXCQ5TGI0 409 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 RAP1GAP2Q684P5 730 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 SLC6A19Q695T7 634 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 CXorf57Q6NSI4 855 aaKnown RBP6.96□□□□□ -1.3
ATXN3-224ENST00000554040 ZSCAN30Q86W11 494 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 MCATQ8IVS2 390 aaKnown RBP6.96□□□□□ -1.3
ATXN3-224ENST00000554040 SLITRK4Q8IW52 837 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 SRRM1Q8IYB3 904 aaKnown RBP6.96□□□□□ -1.3
ATXN3-224ENST00000554040 CCAR2Q8N163 923 aaKnown RBP6.96□□□□□ -1.3
ATXN3-224ENST00000554040 Q8N9G6 341 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-224ENST00000554040 TEX19Q8NA77 164 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 KYQ8NBH2 561 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 CHST14Q8NCH0 376 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 CCDC150Q8NCX0 1101 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 OR2A12Q8NGT7 310 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 UBA3Q8TBC4 463 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 PIWIL2Q8TC59 973 aaKnown RBP6.96□□□□□ -1.3
ATXN3-224ENST00000554040 APOBEC4Q8WW27 367 aaKnown RBP6.96□□□□□ -1.3
ATXN3-224ENST00000554040 ASB12Q8WXK4 309 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 RNF34Q969K3 372 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 SERPINB11Q96P15 392 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 FEM1AQ9BSK4 669 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 CUEDC2Q9H467 287 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 ZNF768Q9H5H4 540 aaKnown RBP6.96□□□□□ -1.3
ATXN3-224ENST00000554040 SP110Q9HB58 689 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 SIRPGQ9P1W8 387 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 HESX1Q9UBX0 185 aa6.96□□□□□ -1.3
ATXN3-224ENST00000554040 APPL1Q9UKG1 709 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms