RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 KLHDC8BQ8IXV7 354 aa12.3□□□□□ -0.44
SHMT2-207ENST00000553837 FIBCD1Q8N539 461 aa12.3□□□□□ -0.44
SHMT2-207ENST00000553837 ZNF781Q8N8C0 355 aa12.3□□□□□ -0.44
SHMT2-207ENST00000553837 URGCPQ8TCY9 931 aa12.3□□□□□ -0.44
SHMT2-207ENST00000553837 EFHD2Q96C19 240 aaPredicted RBP12.3□□□□□ -0.44
SHMT2-207ENST00000553837 RCN3Q96D15 328 aa12.3□□□□□ -0.44
SHMT2-207ENST00000553837 OR52B2Q96RD2 323 aa12.3□□□□□ -0.44
SHMT2-207ENST00000553837 ADAM2Q99965 735 aa12.3□□□□□ -0.44
SHMT2-207ENST00000553837 HEPHQ9BQS7 1158 aa12.3□□□□□ -0.44
SHMT2-207ENST00000553837 UPF3AQ9H1J1 476 aaKnown RBP12.3□□□□□ -0.44
SHMT2-207ENST00000553837 OSBPL2Q9H1P3 480 aa12.3□□□□□ -0.44
SHMT2-207ENST00000553837 NMUR1Q9HB89 426 aa12.3□□□□□ -0.44
SHMT2-207ENST00000553837 ATAD3AQ9NVI7 634 aa12.3□□□□□ -0.44
SHMT2-207ENST00000553837 GID8Q9NWU2 228 aa12.3□□□□□ -0.44
SHMT2-207ENST00000553837 IPO11Q9UI26 975 aaKnown RBP12.3□□□□□ -0.44
SHMT2-207ENST00000553837 TIMM22Q9Y584 194 aa12.3□□□□□ -0.44
SHMT2-207ENST00000553837 A0A0U1RQF3 1178 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 TNFRSF10BO14763 440 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 IRAK2O43187 625 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 MTSS1O43312 755 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 FOXD2O60548 495 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-207ENST00000553837 KPNA6O60684 536 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 SULT1C4O75897 302 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 INHBBP09529 407 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 SBK3P0C264 359 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 PTPN2P17706 415 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 UGT1A6P19224 532 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 POLR2EP19388 210 aaKnown RBP12.29□□□□□ -0.44
SHMT2-207ENST00000553837 UGT1A1P22309 533 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 UGT1A4P22310 534 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 UGT1A3P35503 534 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 UGT1A5P35504 534 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 NPY2RP49146 381 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 KCNC4Q03721 635 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 GRM3Q14832 879 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 HERC3Q15034 1050 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 PPM1LQ5SGD2 360 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 OVOS1Q6IE37 1185 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 OGFOD2Q6N063 350 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 C14orf80Q86SX3 495 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 MYO1HQ8N1T3 1032 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 TMEM151AQ8N4L1 468 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 RNF148Q8N7C7 305 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 TNIP2Q8NFZ5 429 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 CLIP3Q96DZ5 547 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 VPS39Q96JC1 886 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 TSGA13Q96PP4 275 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 ZIC5Q96T25 663 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 SLC39A8Q9C0K1 460 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 TRPV6Q9H1D0 765 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 SEMA6AQ9H2E6 1030 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 CXorf21Q9HAI6 301 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 TRNAU1APQ9NX07 287 aaKnown RBP12.29□□□□□ -0.44
SHMT2-207ENST00000553837 OSER1Q9NX31 292 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 RABL2BQ9UNT1 228 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 NYNRINQ9P2P1 1898 aaKnown RBP12.29□□□□□ -0.44
SHMT2-207ENST00000553837 TRIM38O00635 465 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 HTRA2O43464 458 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-207ENST00000553837 TIMM44O43615 452 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 MAFKO60675 156 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 ADAMTS4O75173 837 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 TADA2AO75478 443 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 ATE1O95260 518 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 ASGR1P07306 291 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 CCR10P46092 362 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 EIF2B2P49770 351 aaKnown RBP12.29□□□□□ -0.44
SHMT2-207ENST00000553837 ATXN3P54252 364 aaPredicted RBP12.29□□□□□ -0.44
SHMT2-207ENST00000553837 RGS21Q2M5E4 152 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 MANEALQ5VSG8 457 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 LYSMD3Q7Z3D4 306 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 MFSD6LQ8IWD5 586 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 TDRD5Q8NAT2 981 aaKnown RBP12.29□□□□□ -0.44
SHMT2-207ENST00000553837 MAPK15Q8TD08 544 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 TOP1MTQ969P6 601 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 ATP6V1E2Q96A05 226 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 ASB9Q96DX5 294 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 VAT1Q99536 393 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 DOK1Q99704 481 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 KIFC1Q9BW19 673 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 C1QTNF1Q9BXJ1 281 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 IL22Q9GZX6 179 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 RPF2Q9H7B2 306 aaKnown RBP12.29□□□□□ -0.44
SHMT2-207ENST00000553837 PATJQ8NI35 1801 aa12.29□□□□□ -0.44
SHMT2-207ENST00000553837 PHGDHO43175 533 aaKnown RBP12.28□□□□□ -0.44
SHMT2-207ENST00000553837 CNOT3O75175 753 aaKnown RBP12.28□□□□□ -0.44
SHMT2-207ENST00000553837 H2AFYO75367 372 aaKnown RBP12.28□□□□□ -0.44
SHMT2-207ENST00000553837 ARNTP27540 789 aa12.28□□□□□ -0.44
SHMT2-207ENST00000553837 CDH17Q12864 832 aa12.28□□□□□ -0.44
SHMT2-207ENST00000553837 TUSC3Q13454 348 aa12.28□□□□□ -0.44
SHMT2-207ENST00000553837 ATP1A4Q13733 1029 aa12.28□□□□□ -0.44
SHMT2-207ENST00000553837 SDHAF4Q5VUM1 108 aa12.28□□□□□ -0.44
SHMT2-207ENST00000553837 EGFLAMQ63HQ2 1017 aa12.28□□□□□ -0.44
SHMT2-207ENST00000553837 TTC33Q6PID6 262 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-207ENST00000553837 METTL23Q86XA0 190 aa12.28□□□□□ -0.44
SHMT2-207ENST00000553837 SCML4Q8N228 414 aa12.28□□□□□ -0.44
SHMT2-207ENST00000553837 TRUB1Q8WWH5 349 aaKnown RBP12.28□□□□□ -0.44
SHMT2-207ENST00000553837 LRTOMTQ8WZ04 291 aa12.28□□□□□ -0.44
SHMT2-207ENST00000553837 FCRL2Q96LA5 508 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-207ENST00000553837 ILKAPQ9H0C8 392 aaPredicted RBP12.28□□□□□ -0.44
SHMT2-207ENST00000553837 ARMC7Q9H6L4 198 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms