RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 C10orf120Q5SQS8 335 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 RARS2Q5T160 578 aaKnown RBP12.95□□□□□ -0.34
SHMT2-205ENST00000553474 RBM20Q5T481 1227 aaKnown RBP12.95□□□□□ -0.34
SHMT2-205ENST00000553474 MFN1Q8IWA4 741 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 PQLC1Q8N2U9 271 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 OR6P1Q8NGX9 317 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 BRSK1Q8TDC3 778 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 RCN3Q96D15 328 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 RPRD1AQ96P16 312 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-205ENST00000553474 CATSPER2Q96P56 530 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 CDRT15Q96T59 188 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 HTATIP2Q9BUP3 242 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 MAGEH1Q9H213 219 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 Q9H521 79 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 INTS10Q9NVR2 710 aaKnown RBP12.95□□□□□ -0.34
SHMT2-205ENST00000553474 GTSE1Q9NYZ3 720 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 ADAMTS6Q9UKP5 1117 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 ANKRD36A6QL64 1941 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 LTBP2Q14767 1821 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 H7C4K7 107 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 B4GALT3O60512 393 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 SMIM24O75264 130 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 ZMPSTE24O75844 475 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 BCAS2O75934 225 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-205ENST00000553474 CNTN5O94779 1100 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 SERPINF2P08697 491 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 ZDHHC11BP0C7U3 371 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 FDXRP22570 491 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 FGFR3P22607 806 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 PAX7P23759 505 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 OR1E1P30953 314 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 CCL23P55773 120 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 USP46P62068 366 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 DSC2Q02487 901 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 ZNF235Q14590 738 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 TRAF7Q6Q0C0 670 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 HACD2Q6Y1H2 254 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 LRRC8DQ7L1W4 858 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 CUZD1Q86UP6 607 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 ICA1LQ8NDH6 482 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 IGSF8Q969P0 613 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 HDAC10Q969S8 669 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 SCLYQ96I15 445 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 LBHD1Q9BQE6 289 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-205ENST00000553474 SUCOQ9UBS9 1254 aaKnown RBP12.94□□□□□ -0.34
SHMT2-205ENST00000553474 PRKAG2Q9UGJ0 569 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 SARDHQ9UL12 918 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 ARIH1Q9Y4X5 557 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-205ENST00000553474 TET1Q8NFU7 2136 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 TCAF2A6NFQ2 919 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 AURKAO14965 403 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 UBDO15205 165 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 AP1G1O43747 822 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 RPP40O75818 363 aaKnown RBP12.94□□□□□ -0.34
SHMT2-205ENST00000553474 SELPP16109 830 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 CCR10P46092 362 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 HSPA13P48723 471 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 THOP1P52888 689 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 MAXP61244 160 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 HERVK_113P63132 956 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 TRIP10Q15642 601 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 TYSND1Q2T9J0 566 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 PPM1LQ5SGD2 360 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 RAP1GAP2Q684P5 730 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 RNF111Q6ZNA4 994 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 KDELC2Q7Z4H8 507 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 PTAR1Q7Z6K3 402 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-205ENST00000553474 ISCA2Q86U28 154 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 ZNF354CQ86Y25 554 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 ABI1Q8IZP0 508 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 ADCY4Q8NFM4 1077 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 ASB9Q96DX5 294 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 TCF12Q99081 682 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 NDNQ99608 321 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 SLC25A23Q9BV35 468 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 ERVK-6Q9BXR3 956 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.94□□□□□ -0.345e-12■■□□□ 11.4
SHMT2-205ENST00000553474 TBX21Q9UL17 535 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 VPS9D1Q9Y2B5 631 aa12.94□□□□□ -0.34
SHMT2-205ENST00000553474 GBF1Q92538 1859 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 SLC12A8A0AV02 714 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 F5H5T6 163 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 TRIM38O00635 465 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 CD3EAPO15446 510 aaKnown RBP12.93□□□□□ -0.34
SHMT2-205ENST00000553474 GPC4O75487 556 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 CRTAMO95727 393 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 NDST3O95803 873 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 CAPNS1P04632 268 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 JUNP05412 331 aaKnown RBP12.93□□□□□ -0.34
SHMT2-205ENST00000553474 FGF4P08620 206 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 PSMA3P25788 255 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 TAF10Q12962 218 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 PEX6Q13608 980 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 PTK2BQ14289 1009 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 ZNF678Q5SXM1 525 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 IRAK1BP1Q5VVH5 260 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 RAB44Q7Z6P3 723 aaPredicted RBP12.93□□□□□ -0.34
SHMT2-205ENST00000553474 OVCA2Q8WZ82 227 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 KLHL5Q96PQ7 755 aa12.93□□□□□ -0.34
SHMT2-205ENST00000553474 SEMA3CQ99985 751 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms