RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 DPM1O60762 260 aa11.78□□□□□ -0.52
SNRPF-205ENST00000553192 POP4O95707 220 aaKnown RBP11.78□□□□□ -0.52
SNRPF-205ENST00000553192 GSRP00390 522 aa11.78□□□□□ -0.52
SNRPF-205ENST00000553192 ACVRL1P37023 503 aa11.78□□□□□ -0.52
SNRPF-205ENST00000553192 STAT1P42224 750 aa11.78□□□□□ -0.52
SNRPF-205ENST00000553192 ACADSBP45954 432 aa11.78□□□□□ -0.52
SNRPF-205ENST00000553192 YWHAEP62258 255 aaKnown RBP11.78□□□□□ -0.52
SNRPF-205ENST00000553192 GPLD1P80108 840 aa11.78□□□□□ -0.52
SNRPF-205ENST00000553192 DNM1Q05193 864 aaKnown RBP11.78□□□□□ -0.52
SNRPF-205ENST00000553192 LRMPQ12912 555 aa11.78□□□□□ -0.52
SNRPF-205ENST00000553192 DNASE1L3Q13609 305 aa11.78□□□□□ -0.52
SNRPF-205ENST00000553192 STILQ15468 1287 aa11.78□□□□□ -0.52
SNRPF-205ENST00000553192 CHRNA6Q15825 494 aa11.78□□□□□ -0.52
SNRPF-205ENST00000553192 PLEKHN1Q494U1 663 aaPredicted RBP11.78□□□□□ -0.52
SNRPF-205ENST00000553192 DENND1BQ6P3S1 775 aa11.78□□□□□ -0.52
SNRPF-205ENST00000553192 LYSMD3Q7Z3D4 306 aa11.78□□□□□ -0.52
SNRPF-205ENST00000553192 ARHGEF2Q92974 986 aaKnown RBP11.78□□□□□ -0.52
SNRPF-205ENST00000553192 BARD1Q99728 777 aaKnown RBP11.78□□□□□ -0.52
SNRPF-205ENST00000553192 ING2Q9H160 280 aa11.78□□□□□ -0.52
SNRPF-205ENST00000553192 PCDHGB7Q9Y5F8 929 aa11.78□□□□□ -0.52
SNRPF-205ENST00000553192 ARGFXA6NJG6 315 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 LRRTM2O43300 516 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 HOXC4P09017 264 aaPredicted RBP11.77□□□□□ -0.53
SNRPF-205ENST00000553192 HNRNPH3P31942 346 aaKnown RBP11.77□□□□□ -0.53
SNRPF-205ENST00000553192 PTGER4P35408 488 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 TRIM23P36406 574 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 NASPP49321 788 aaPredicted RBP11.77□□□□□ -0.53
SNRPF-205ENST00000553192 LIG3P49916 1009 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 GNA12Q03113 381 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 NME3Q13232 169 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 CRB2Q5IJ48 1285 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 SLC30A9Q6PML9 568 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 ZNF783Q6ZMS7 281 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 LINC00301Q8NCQ3 95 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 FDCSPQ8NFU4 85 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 STK32AQ8WU08 396 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 HMCESQ96FZ2 354 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 MED15Q96RN5 788 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 NUDT9Q9BW91 350 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 GSDMCQ9BYG8 508 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 ACTL8Q9H568 366 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 CARS2Q9HA77 564 aaKnown RBP11.77□□□□□ -0.53
SNRPF-205ENST00000553192 ACSS2Q9NR19 701 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 PIGVQ9NUD9 493 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 ARHGEF38Q9NXL2 777 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 MOSPD1Q9UJG1 213 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 NTNG1Q9Y2I2 539 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 PCDHB4Q9Y5E5 795 aa11.77□□□□□ -0.53
SNRPF-205ENST00000553192 GRAP2O75791 330 aa11.76□□□□□ -0.53
SNRPF-205ENST00000553192 TFE3P19532 575 aaPredicted RBP11.76□□□□□ -0.53
SNRPF-205ENST00000553192 KELP23276 732 aa11.76□□□□□ -0.53
SNRPF-205ENST00000553192 KRTAP10-9P60411 292 aa11.76□□□□□ -0.53
SNRPF-205ENST00000553192 SNRPD1P62314 119 aaKnown RBP11.76□□□□□ -0.53
SNRPF-205ENST00000553192 CDK18Q07002 472 aa11.76□□□□□ -0.53
SNRPF-205ENST00000553192 ILF3Q12906 894 aaKnown RBP eCLIP11.76□□□□□ -0.53
SNRPF-205ENST00000553192 MTA1Q13330 715 aa11.76□□□□□ -0.53
SNRPF-205ENST00000553192 ADAM9Q13443 819 aa11.76□□□□□ -0.53
SNRPF-205ENST00000553192 BIRC2Q13490 618 aa11.76□□□□□ -0.53
SNRPF-205ENST00000553192 IL10RAQ13651 578 aa11.76□□□□□ -0.53
SNRPF-205ENST00000553192 LAMB3Q13751 1172 aa11.76□□□□□ -0.53
SNRPF-205ENST00000553192 RAPGEF1Q13905 1077 aa11.76□□□□□ -0.53
SNRPF-205ENST00000553192 UGT8Q16880 541 aa11.76□□□□□ -0.53
SNRPF-205ENST00000553192 WDR74Q6RFH5 385 aaPredicted RBP11.76□□□□□ -0.53
SNRPF-205ENST00000553192 LEKR1Q6ZMV7 388 aa11.76□□□□□ -0.53
SNRPF-205ENST00000553192 ZNF295-AS1Q8N0V1 137 aa11.76□□□□□ -0.53
SNRPF-205ENST00000553192 CT55Q8WUE5 264 aa11.76□□□□□ -0.53
SNRPF-205ENST00000553192 THAP4Q8WY91 577 aa11.76□□□□□ -0.53
SNRPF-205ENST00000553192 TRIM8Q9BZR9 551 aa11.76□□□□□ -0.53
SNRPF-205ENST00000553192 TKTL2Q9H0I9 626 aa11.76□□□□□ -0.53
SNRPF-205ENST00000553192 SUDS3Q9H7L9 328 aaPredicted RBP11.76□□□□□ -0.53
SNRPF-205ENST00000553192 PCDH12Q9NPG4 1184 aa11.76□□□□□ -0.53
SNRPF-205ENST00000553192 EXOC1Q9NV70 894 aa11.76□□□□□ -0.53
SNRPF-205ENST00000553192 PKDREJQ9NTG1 2253 aa11.75□□□□□ -0.53
SNRPF-205ENST00000553192 CXorf51AA0A1B0GTR3 108 aa11.75□□□□□ -0.53
SNRPF-205ENST00000553192 GOLGA6L3A6NEY3 463 aa11.75□□□□□ -0.53
SNRPF-205ENST00000553192 INSIG1O15503 277 aa11.75□□□□□ -0.53
SNRPF-205ENST00000553192 KIAA0754O94854 1291 aa11.75□□□□□ -0.53
SNRPF-205ENST00000553192 CEACAM5P06731 702 aa11.75□□□□□ -0.53
SNRPF-205ENST00000553192 GM2AP17900 193 aa11.75□□□□□ -0.53
SNRPF-205ENST00000553192 TBXAS1P24557 533 aaPredicted RBP11.75□□□□□ -0.53
SNRPF-205ENST00000553192 CASP14P31944 242 aa11.75□□□□□ -0.53
SNRPF-205ENST00000553192 NDST2P52849 883 aa11.75□□□□□ -0.53
SNRPF-205ENST00000553192 RPS18P62269 152 aaKnown RBP11.75□□□□□ -0.53
SNRPF-205ENST00000553192 CTBSQ01459 385 aa11.75□□□□□ -0.53
SNRPF-205ENST00000553192 ELP6Q0PNE2 266 aa11.75□□□□□ -0.53
SNRPF-205ENST00000553192 ELOAQ14241 798 aaKnown RBP11.75□□□□□ -0.53
SNRPF-205ENST00000553192 POLD3Q15054 466 aaPredicted RBP11.75□□□□□ -0.53
SNRPF-205ENST00000553192 TSR1Q2NL82 804 aaKnown RBP11.75□□□□□ -0.53
SNRPF-205ENST00000553192 ZCWPW2Q504Y3 356 aa11.75□□□□□ -0.53
SNRPF-205ENST00000553192 MIIPQ5JXC2 388 aa11.75□□□□□ -0.53
SNRPF-205ENST00000553192 ZNF517Q6ZMY9 492 aaPredicted RBP11.75□□□□□ -0.53
SNRPF-205ENST00000553192 RHOT1Q8IXI2 618 aa11.75□□□□□ -0.53
SNRPF-205ENST00000553192 IQCKQ8N0W5 287 aa11.75□□□□□ -0.53
SNRPF-205ENST00000553192 NETO2Q8NC67 525 aa11.75□□□□□ -0.53
SNRPF-205ENST00000553192 OR10G6Q8NH81 332 aa11.75□□□□□ -0.53
SNRPF-205ENST00000553192 STAMBPL1Q96FJ0 436 aa11.75□□□□□ -0.53
SNRPF-205ENST00000553192 ZMYND15Q9H091 742 aa11.75□□□□□ -0.53
SNRPF-205ENST00000553192 AKIRIN1Q9H9L7 192 aaPredicted RBP11.75□□□□□ -0.53
SNRPF-205ENST00000553192 NDFIP2Q9NV92 336 aa11.75□□□□□ -0.53
SNRPF-205ENST00000553192 TRNAU1APQ9NX07 287 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms