RNA–Protein interactions for RNA: ENST00000552295.5

BEST3-211, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-211ENST00000552295 GCM1Q9NP62 436 aa8.19□□□□□ -1.1
BEST3-211ENST00000552295 IPO11Q9UI26 975 aaKnown RBP8.19□□□□□ -1.1
BEST3-211ENST00000552295 FBXO10Q9UK96 956 aa8.19□□□□□ -1.1
BEST3-211ENST00000552295 MUC22E2RYF6 1773 aaPredicted RBP8.18□□□□□ -1.1
BEST3-211ENST00000552295 C5orf60A6NFR6 353 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 J3KR12 359 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 KCNK1O00180 336 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 RNF103O00237 685 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 ARNTLO00327 626 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 MATN3O15232 486 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 CHADO15335 359 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 MTSS1O43312 755 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 KDELR3O43731 214 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 PSPNO60542 156 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 PRAMEF11O60813 436 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 ZNF189O75820 626 aaPredicted RBP8.18□□□□□ -1.1
BEST3-211ENST00000552295 ZMPSTE24O75844 475 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 IFNB1P01574 187 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 KRT14P02533 472 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 PTPN3P26045 913 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 IVDP26440 423 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 HLA-FP30511 346 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 GDI1P31150 447 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 CD70P32970 193 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 RPL22P35268 128 aaKnown RBP8.18□□□□□ -1.1
BEST3-211ENST00000552295 ETFBP38117 255 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 NUMBP49757 651 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 PLK1P53350 603 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 IFI35P80217 286 aaPredicted RBP8.18□□□□□ -1.1
BEST3-211ENST00000552295 IL10RBQ08334 325 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 ZBTB17Q13105 803 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 SLC12A1Q13621 1099 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 RUNX3Q13761 415 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 PPP1R7Q15435 360 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 TRIP13Q15645 432 aaPredicted RBP8.18□□□□□ -1.1
BEST3-211ENST00000552295 P3H1Q32P28 736 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 FAM182AQ5T1J6 154 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 CCDC70Q6NSX1 233 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 TIGD7Q6NT04 549 aaPredicted RBP8.18□□□□□ -1.1
BEST3-211ENST00000552295 KIAA0907Q7Z7F0 614 aaPredicted RBP8.18□□□□□ -1.1
BEST3-211ENST00000552295 CCDC117Q8IWD4 279 aaPredicted RBP8.18□□□□□ -1.1
BEST3-211ENST00000552295 YAF2Q8IY57 180 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 APCDD1Q8J025 514 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.18□□□□□ -1.1
BEST3-211ENST00000552295 CCDC89Q8N998 374 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 DCAF4L2Q8NA75 395 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 SEC14L1Q92503 715 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 MAML1Q92585 1016 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 ZNF419Q96HQ0 510 aaPredicted RBP8.18□□□□□ -1.1
BEST3-211ENST00000552295 SPATA13Q96N96 652 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 IL12RB2Q99665 862 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 ERP44Q9BS26 406 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 TRMT61BQ9BVS5 477 aaKnown RBP8.18□□□□□ -1.1
BEST3-211ENST00000552295 SLC2A11Q9BYW1 496 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 RAB17Q9H0T7 212 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 ABCB8Q9NUT2 735 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 KIAA1522Q9P206 1035 aaPredicted RBP8.18□□□□□ -1.1
BEST3-211ENST00000552295 EBF1Q9UH73 591 aa8.18□□□□□ -1.1
BEST3-211ENST00000552295 INTS6Q9UL03 887 aaKnown RBP8.18□□□□□ -1.1
BEST3-211ENST00000552295 MYO18AQ92614 2054 aaKnown RBP8.18□□□□□ -1.1
BEST3-211ENST00000552295 ESYT3A0FGR9 886 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 SHISA3A0PJX4 238 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 TARSL2A2RTX5 802 aaKnown RBP8.17□□□□□ -1.1
BEST3-211ENST00000552295 OR14I1A6ND48 311 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 CBX4O00257 560 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 TRIM24O15164 1050 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 SNAP91O60641 907 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 GCATO75600 419 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 CD160O95971 181 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 CISD3P0C7P0 127 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 PABPC1P11940 636 aaKnown RBP8.17□□□□□ -1.1
BEST3-211ENST00000552295 CCNB1P14635 433 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 RPL21P46778 160 aaKnown RBP8.17□□□□□ -1.1
BEST3-211ENST00000552295 VPS41P49754 854 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 ARF5P84085 180 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 GUCY2DQ02846 1103 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 TFF2Q03403 129 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 SLC10A7Q0GE19 358 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 TRADDQ15628 312 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 ELF2Q15723 593 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 AAK1Q2M2I8 961 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 PLEKHG6Q3KR16 790 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 FUT11Q495W5 492 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 TEX44Q53QW1 395 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 PITRM1Q5JRX3 1037 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 ANKRD20A2Q5SQ80 823 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 ANKRD20A1Q5TYW2 823 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 ANKRD20A3Q5VUR7 823 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 DUPD1Q68J44 220 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 IL31Q6EBC2 164 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 LEKR1Q6ZMV7 388 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 BNC2Q6ZN30 1099 aaPredicted RBP8.17□□□□□ -1.1
BEST3-211ENST00000552295 ZNF354CQ86Y25 554 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 ZNF567Q8N184 647 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 CPA6Q8N4T0 437 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 CNTD1Q8N815 330 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 NAT16Q8N8M0 369 aa8.17□□□□□ -1.1
BEST3-211ENST00000552295 ZNF557Q8N988 423 aaPredicted RBP8.17□□□□□ -1.1
BEST3-211ENST00000552295 MAFAQ8NHW3 353 aaPredicted RBP8.17□□□□□ -1.1
BEST3-211ENST00000552295 CCDC110Q8TBZ0 833 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms