RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 CATSPERZQ9NTU4 200 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 POLR3BQ9NW08 1133 aaPredicted RBP11.54□□□□□ -0.56
RAB5C-208ENST00000551338 ARMCX1Q9P291 453 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 VPS28Q9UK41 221 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 CORO1CQ9ULV4 474 aaPredicted RBP11.54□□□□□ -0.56
RAB5C-208ENST00000551338 FCF1Q9Y324 198 aaKnown RBP11.54□□□□□ -0.56
RAB5C-208ENST00000551338 PCDHGC4Q9Y5F7 938 aa11.54□□□□□ -0.56
RAB5C-208ENST00000551338 CENPFP49454 3210 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 TRAV19A0A0A6YYK7 116 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 CCL16O15467 120 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 FZD6O60353 706 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 CCDC22O60826 627 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 PIGNO95427 931 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 ATP6V1G2O95670 118 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 CRTAMO95727 393 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 CHRNGP07510 517 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 LTA4HP09960 611 aaKnown RBP11.53□□□□□ -0.56
RAB5C-208ENST00000551338 PFKLP17858 780 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 CCR2P41597 374 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 GRIA4P48058 902 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 IDH3AP50213 366 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 SUOXP51687 545 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 TIAL1Q01085 375 aaKnown RBP eCLIP11.53□□□□□ -0.56
RAB5C-208ENST00000551338 FPGSQ05932 587 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 ILF2Q12905 390 aaKnown RBP11.53□□□□□ -0.56
RAB5C-208ENST00000551338 LMAN2Q12907 356 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 USP4Q13107 963 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 RIPK1Q13546 671 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 CDH18Q13634 790 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 MPPE1Q53F39 396 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 RALGPS1Q5JS13 557 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 ATXN7L2Q5T6C5 722 aaPredicted RBP11.53□□□□□ -0.56
RAB5C-208ENST00000551338 PLPP4Q5VZY2 271 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 AFTPHQ6ULP2 937 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 RINLQ6ZS11 566 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 PIM3Q86V86 326 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 LSMEM2Q8N112 164 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 OR4K2Q8NGD2 314 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 OR4L1Q8NH43 312 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 MAPK15Q8TD08 544 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 ANKRD49Q8WVL7 239 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 MOCOSQ96EN8 888 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 UBXN10Q96LJ8 280 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 RILPQ96NA2 401 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 RAB3IPQ96QF0 476 aaPredicted RBP11.53□□□□□ -0.56
RAB5C-208ENST00000551338 GCNAQ96QF7 691 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 TCF25Q9BQ70 676 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 MRPL57Q9BQC6 102 aaKnown RBP11.53□□□□□ -0.56
RAB5C-208ENST00000551338 CORO1BQ9BR76 489 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 AARSD1Q9BTE6 412 aaKnown RBP11.53□□□□□ -0.56
RAB5C-208ENST00000551338 ZBED2Q9BTP6 218 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 TUBB6Q9BUF5 446 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 TBC1D10AQ9BXI6 508 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 SLC46A2Q9BY10 475 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 HCFC1R1Q9NWW0 138 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 CLEC4EQ9ULY5 219 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 STK38LQ9Y2H1 464 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 ZNF510Q9Y2H8 683 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 VWA7Q9Y334 891 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 RAP2CQ9Y3L5 183 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 INSL6Q9Y581 213 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 IRAK3Q9Y616 596 aa11.53□□□□□ -0.56
RAB5C-208ENST00000551338 KIF26AQ9ULI4 1882 aaPredicted RBP11.53□□□□□ -0.56
RAB5C-208ENST00000551338 HIDE1A8MVS5 230 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 LEFTY2O00292 366 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 NPHS1O60500 1241 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 MOSPD3O75425 235 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 CSPG5O95196 566 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 GLUD1P00367 558 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 SLC4A1P02730 911 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 ENO1P06733 434 aaKnown RBP11.52□□□□□ -0.57
RAB5C-208ENST00000551338 CCDC166P0CW27 439 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 HOXB8P17481 243 aaPredicted RBP11.52□□□□□ -0.57
RAB5C-208ENST00000551338 LPOP22079 712 aaPredicted RBP11.52□□□□□ -0.57
RAB5C-208ENST00000551338 CALB2P22676 271 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 ATP5F1P24539 256 aaPredicted RBP11.52□□□□□ -0.57
RAB5C-208ENST00000551338 SLC8A1P32418 973 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 CTNNB1P35222 781 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 RASSF2P50749 326 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 STC1P52823 247 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 EPHA5P54756 1037 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 ALDH18A1P54886 795 aaKnown RBP11.52□□□□□ -0.57
RAB5C-208ENST00000551338 DNAJB13P59910 316 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 AP1S1P61966 158 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 UBAP2LQ14157 1087 aaKnown RBP11.52□□□□□ -0.57
RAB5C-208ENST00000551338 PTPRRQ15256 657 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 SNCBQ16143 134 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 PPM1LQ5SGD2 360 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 VWA5B1Q5TIE3 1220 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 MRNIPQ6NTE8 343 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 UBE2Q1Q7Z7E8 422 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 LONP2Q86WA8 852 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 ELMOD1Q8N336 334 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 EFHBQ8N7U6 833 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 RIN3Q8TB24 985 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 SHKBP1Q8TBC3 707 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 SCG3Q8WXD2 468 aaKnown RBP11.52□□□□□ -0.57
RAB5C-208ENST00000551338 BHMTQ93088 406 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 SGF29Q96ES7 293 aa11.52□□□□□ -0.57
RAB5C-208ENST00000551338 LMLNQ96KR4 655 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms