RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 PAGE1O75459 146 aa13.47□□□□□ -0.25
SNRPF-203ENST00000551316 EML2O95834 649 aa13.47□□□□□ -0.25
SNRPF-203ENST00000551316 F9P00740 461 aa13.47□□□□□ -0.25
SNRPF-203ENST00000551316 GM2AP17900 193 aa13.47□□□□□ -0.25
SNRPF-203ENST00000551316 MTM1Q13496 603 aa13.47□□□□□ -0.25
SNRPF-203ENST00000551316 FAM199XQ6PEV8 388 aaPredicted RBP13.47□□□□□ -0.25
SNRPF-203ENST00000551316 UNC13DQ70J99 1090 aa13.47□□□□□ -0.25
SNRPF-203ENST00000551316 LYSMD3Q7Z3D4 306 aa13.47□□□□□ -0.25
SNRPF-203ENST00000551316 TTC7BQ86TV6 843 aa13.47□□□□□ -0.25
SNRPF-203ENST00000551316 PRIMA1Q86XR5 153 aa13.47□□□□□ -0.25
SNRPF-203ENST00000551316 RHOT1Q8IXI2 618 aa13.47□□□□□ -0.25
SNRPF-203ENST00000551316 STAMBPL1Q96FJ0 436 aa13.47□□□□□ -0.25
SNRPF-203ENST00000551316 FAM204AQ9H8W3 233 aa13.47□□□□□ -0.25
SNRPF-203ENST00000551316 NCOA6Q14686 2063 aaPredicted RBP13.47□□□□□ -0.25
SNRPF-203ENST00000551316 TMEM200CA6NKL6 621 aa13.46□□□□□ -0.25
SNRPF-203ENST00000551316 H3BQV1 296 aa13.46□□□□□ -0.25
SNRPF-203ENST00000551316 RNF225M0QZC1 329 aaPredicted RBP13.46□□□□□ -0.25
SNRPF-203ENST00000551316 ZNF185O15231 689 aa13.46□□□□□ -0.25
SNRPF-203ENST00000551316 FAM155BO75949 473 aa13.46□□□□□ -0.25
SNRPF-203ENST00000551316 FBXO21O94952 628 aa13.46□□□□□ -0.25
SNRPF-203ENST00000551316 VDRP11473 427 aa13.46□□□□□ -0.25
SNRPF-203ENST00000551316 VARSP26640 1264 aaKnown RBP13.46□□□□□ -0.25
SNRPF-203ENST00000551316 GFERP55789 205 aa13.46□□□□□ -0.25
SNRPF-203ENST00000551316 FOXM1Q08050 763 aa13.46□□□□□ -0.25
SNRPF-203ENST00000551316 ART3Q13508 389 aa13.46□□□□□ -0.25
SNRPF-203ENST00000551316 TMEM52BQ4KMG9 183 aa13.46□□□□□ -0.25
SNRPF-203ENST00000551316 CNNM4Q6P4Q7 775 aa13.46□□□□□ -0.25
SNRPF-203ENST00000551316 PPP1R9BQ96SB3 815 aa13.46□□□□□ -0.25
SNRPF-203ENST00000551316 SPON2Q9BUD6 331 aa13.46□□□□□ -0.25
SNRPF-203ENST00000551316 BRD8Q9H0E9 1235 aa13.46□□□□□ -0.25
SNRPF-203ENST00000551316 SIK2Q9H0K1 926 aa13.46□□□□□ -0.25
SNRPF-203ENST00000551316 CARS2Q9HA77 564 aaKnown RBP13.46□□□□□ -0.25
SNRPF-203ENST00000551316 TMEM8AQ9HCN3 771 aa13.46□□□□□ -0.25
SNRPF-203ENST00000551316 DDIT4Q9NX09 232 aa13.46□□□□□ -0.25
SNRPF-203ENST00000551316 LNPEPQ9UIQ6 1025 aa13.46□□□□□ -0.25
SNRPF-203ENST00000551316 CSAG2Q9Y5P2 127 aa13.46□□□□□ -0.25
SNRPF-203ENST00000551316 KLF2Q9Y5W3 355 aaPredicted RBP13.46□□□□□ -0.25
SNRPF-203ENST00000551316 TRBV23OR9-2A0A075B6M9 112 aa13.45□□□□□ -0.26
SNRPF-203ENST00000551316 HTR1EP28566 365 aa13.45□□□□□ -0.26
SNRPF-203ENST00000551316 MAN1A1P33908 653 aa13.45□□□□□ -0.26
SNRPF-203ENST00000551316 ACVRL1P37023 503 aa13.45□□□□□ -0.26
SNRPF-203ENST00000551316 RPL34P49207 117 aaKnown RBP13.45□□□□□ -0.26
SNRPF-203ENST00000551316 ART1P52961 327 aa13.45□□□□□ -0.26
SNRPF-203ENST00000551316 CEBPZQ03701 1054 aaKnown RBP13.45□□□□□ -0.26
SNRPF-203ENST00000551316 STK4Q13043 487 aa13.45□□□□□ -0.26
SNRPF-203ENST00000551316 CUL2Q13617 745 aa13.45□□□□□ -0.26
SNRPF-203ENST00000551316 CUZD1Q86UP6 607 aa13.45□□□□□ -0.26
SNRPF-203ENST00000551316 KCNMB4Q86W47 210 aa13.45□□□□□ -0.26
SNRPF-203ENST00000551316 ZSWIM9Q86XI8 627 aa13.45□□□□□ -0.26
SNRPF-203ENST00000551316 ADAMTS17Q8TE56 1095 aa13.45□□□□□ -0.26
SNRPF-203ENST00000551316 TMEM174Q8WUU8 243 aa13.45□□□□□ -0.26
SNRPF-203ENST00000551316 DHX58Q96C10 678 aa13.45□□□□□ -0.26
SNRPF-203ENST00000551316 ARHGEF26Q96DR7 871 aa13.45□□□□□ -0.26
SNRPF-203ENST00000551316 DNAI2Q9GZS0 605 aa13.45□□□□□ -0.26
SNRPF-203ENST00000551316 ATP13A1Q9HD20 1204 aa13.45□□□□□ -0.26
SNRPF-203ENST00000551316 LHX9Q9NQ69 397 aa13.45□□□□□ -0.26
SNRPF-203ENST00000551316 NEU2Q9Y3R4 380 aa13.45□□□□□ -0.26
SNRPF-203ENST00000551316 PCDHGA10Q9Y5H3 936 aa13.45□□□□□ -0.26
SNRPF-203ENST00000551316 COPG1Q9Y678 874 aaKnown RBP13.45□□□□□ -0.26
SNRPF-203ENST00000551316 INSIG1O15503 277 aa13.44□□□□□ -0.26
SNRPF-203ENST00000551316 NDUFA10O95299 355 aa13.44□□□□□ -0.26
SNRPF-203ENST00000551316 CD1EP15812 388 aa13.44□□□□□ -0.26
SNRPF-203ENST00000551316 TFE3P19532 575 aaPredicted RBP13.44□□□□□ -0.26
SNRPF-203ENST00000551316 GPLD1P80108 840 aa13.44□□□□□ -0.26
SNRPF-203ENST00000551316 CUL4BQ13620 913 aa13.44□□□□□ -0.26
SNRPF-203ENST00000551316 CDSNQ15517 529 aa13.44□□□□□ -0.26
SNRPF-203ENST00000551316 ZNF630Q2M218 657 aaPredicted RBP13.44□□□□□ -0.26
SNRPF-203ENST00000551316 GDPD4Q6W3E5 623 aa13.44□□□□□ -0.26
SNRPF-203ENST00000551316 BNC2Q6ZN30 1099 aaPredicted RBP13.44□□□□□ -0.26
SNRPF-203ENST00000551316 GRAMD1CQ8IYS0 662 aa13.44□□□□□ -0.26
SNRPF-203ENST00000551316 ATL2Q8NHH9 583 aa13.44□□□□□ -0.26
SNRPF-203ENST00000551316 SLC37A2Q8TED4 501 aa13.44□□□□□ -0.26
SNRPF-203ENST00000551316 HSFY1Q96LI6 401 aa13.44□□□□□ -0.26
SNRPF-203ENST00000551316 ZSCAN31Q96LW9 406 aaPredicted RBP13.44□□□□□ -0.26
SNRPF-203ENST00000551316 SMAD5Q99717 465 aaKnown RBP13.44□□□□□ -0.26
SNRPF-203ENST00000551316 C7orf25Q9BPX7 421 aa13.44□□□□□ -0.26
SNRPF-203ENST00000551316 AJAP1Q9UKB5 411 aaPredicted RBP13.44□□□□□ -0.26
SNRPF-203ENST00000551316 B3GNT3Q9Y2A9 372 aa13.44□□□□□ -0.26
SNRPF-203ENST00000551316 PCDHGB7Q9Y5F8 929 aa13.44□□□□□ -0.26
SNRPF-203ENST00000551316 GOLGA6L3A6NEY3 463 aa13.43□□□□□ -0.26
SNRPF-203ENST00000551316 E5RJQ4 531 aa13.43□□□□□ -0.26
SNRPF-203ENST00000551316 CACNB4O00305 520 aaPredicted RBP13.43□□□□□ -0.26
SNRPF-203ENST00000551316 PIGNO95427 931 aa13.43□□□□□ -0.26
SNRPF-203ENST00000551316 RECKO95980 971 aa13.43□□□□□ -0.26
SNRPF-203ENST00000551316 CCR1P32246 355 aa13.43□□□□□ -0.26
SNRPF-203ENST00000551316 GARSP41250 739 aaKnown RBP13.43□□□□□ -0.26
SNRPF-203ENST00000551316 GNPDA1P46926 289 aa13.43□□□□□ -0.26
SNRPF-203ENST00000551316 PPM1FP49593 454 aaPredicted RBP13.43□□□□□ -0.26
SNRPF-203ENST00000551316 LIG3P49916 1009 aa13.43□□□□□ -0.26
SNRPF-203ENST00000551316 CTBSQ01459 385 aa13.43□□□□□ -0.26
SNRPF-203ENST00000551316 BIRC2Q13490 618 aa13.43□□□□□ -0.26
SNRPF-203ENST00000551316 PCM1Q15154 2024 aa13.43□□□□□ -0.26
SNRPF-203ENST00000551316 EFHC1Q5JVL4 640 aa13.43□□□□□ -0.26
SNRPF-203ENST00000551316 NUP210LQ5VU65 1888 aa13.43□□□□□ -0.26
SNRPF-203ENST00000551316 BEND5Q7L4P6 421 aa13.43□□□□□ -0.26
SNRPF-203ENST00000551316 SETD3Q86TU7 594 aaPredicted RBP13.43□□□□□ -0.26
SNRPF-203ENST00000551316 DEFB106AQ8N104 65 aa13.43□□□□□ -0.26
SNRPF-203ENST00000551316 TTC39CQ8N584 583 aa13.43□□□□□ -0.26
SNRPF-203ENST00000551316 OR2AP1Q8NGE2 309 aa13.43□□□□□ -0.26
SNRPF-203ENST00000551316 GOLGA5Q8TBA6 731 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms