RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 MICAL3Q7RTP6 2002 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 UBA6A0AVT1 1052 aaPredicted RBP11.14□□□□□ -0.63
LINC00661-204ENST00000549354 NCAM2O15394 837 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 AHSGP02765 367 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 CCL5P13501 91 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 HOXC13P31276 330 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 GGT5P36269 586 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 SERPINB8P50452 374 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 RPL14P50914 215 aaKnown RBP11.14□□□□□ -0.63
LINC00661-204ENST00000549354 CSE1LP55060 971 aaKnown RBP11.14□□□□□ -0.63
LINC00661-204ENST00000549354 SMARCB1Q12824 385 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 MSANTD2Q6P1R3 559 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 CNSTQ6PJW8 725 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 SLC39A5Q6ZMH5 540 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 HDAC11Q96DB2 347 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 DEFB118Q96PH6 123 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 COQ10BQ9H8M1 238 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 EIF2B3Q9NR50 452 aaKnown RBP11.14□□□□□ -0.63
LINC00661-204ENST00000549354 COMMD8Q9NX08 183 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 PRG3Q9Y2Y8 225 aaPredicted RBP11.14□□□□□ -0.63
LINC00661-204ENST00000549354 ERI2A8K979 691 aaKnown RBP11.14□□□□□ -0.63
LINC00661-204ENST00000549354 IRAK2O43187 625 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 SIX3O95343 332 aaPredicted RBP11.14□□□□□ -0.63
LINC00661-204ENST00000549354 ALDH2P05091 517 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 KCNA5P22460 613 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 CNTFP26441 200 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 SLC11A1P49279 550 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 NRG1Q02297 640 aaPredicted RBP11.14□□□□□ -0.63
LINC00661-204ENST00000549354 OGFRL1Q5TC84 451 aaPredicted RBP11.14□□□□□ -0.63
LINC00661-204ENST00000549354 KRT80Q6KB66 452 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 DPF3Q92784 378 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 CPNE1Q99829 537 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 Q9H521 79 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 NOL11Q9H8H0 719 aaKnown RBP11.14□□□□□ -0.63
LINC00661-204ENST00000549354 MKS1Q9NXB0 559 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 HSFX1Q9UBD0 423 aa11.14□□□□□ -0.63
LINC00661-204ENST00000549354 FNDC1Q4ZHG4 1894 aaPredicted RBP11.13□□□□□ -0.63
LINC00661-204ENST00000549354 ZNF839A8K0R7 811 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 A8MX80 341 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 TMX2-CTNND1H3BSU7 103 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 HDAC3O15379 428 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 TIPRLO75663 272 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 FAM58BPP0C7Q3 252 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 ME2P23368 584 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 GRIK1P39086 918 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 STT3AP46977 705 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 HTRA3P83110 453 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 ELAVL2Q12926 359 aaKnown RBP11.13□□□□□ -0.63
LINC00661-204ENST00000549354 ADGRE1Q14246 886 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 MANEALQ5VSG8 457 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 B3GNT6Q6ZMB0 384 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 PDZD4Q76G19 769 aaPredicted RBP11.13□□□□□ -0.63
LINC00661-204ENST00000549354 SREK1Q8WXA9 508 aaKnown RBP11.13□□□□□ -0.63
LINC00661-204ENST00000549354 TMEM79Q9BSE2 394 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 GPR62Q9BZJ7 368 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 POMKQ9H5K3 350 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 ALG9Q9H6U8 611 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 ZDHHC7Q9NXF8 308 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 FAM8A1Q9UBU6 413 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 CDYLQ9Y232 598 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 PCDHB5Q9Y5E4 795 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 PRUNE2Q8WUY3 3088 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 C7orf72A4D263 438 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 PLOD2O00469 737 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 AKAP10O43572 662 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 BNIP3LO60238 219 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 ALDH1A2O94788 518 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 STAMBPO95630 424 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 TFPTP0C1Z6 253 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 TAS2R39P59534 338 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 ZNF33AQ06730 810 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 ZNF423Q2M1K9 1284 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 MAP7D1Q3KQU3 841 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 TRIM67Q6ZTA4 783 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 MON1AQ86VX9 555 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 ABI1Q8IZP0 508 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 BLOC1S5Q8TDH9 187 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 ACMSDQ8TDX5 336 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 LRCH3Q96II8 777 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 SLC29A1Q99808 456 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 LRRC40Q9H9A6 602 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 TNFRSF12AQ9NP84 129 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 NT5MQ9NPB1 228 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 RBM22Q9NW64 420 aaKnown RBP eCLIP11.13□□□□□ -0.63
LINC00661-204ENST00000549354 ABI2Q9NYB9 513 aaPredicted RBP11.13□□□□□ -0.63
LINC00661-204ENST00000549354 FAM50BQ9Y247 325 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 ZNF711Q9Y462 761 aa11.13□□□□□ -0.63
LINC00661-204ENST00000549354 COPG1Q9Y678 874 aaKnown RBP11.13□□□□□ -0.63
LINC00661-204ENST00000549354 ZNF638Q14966 1978 aaKnown RBP11.13□□□□□ -0.63
LINC00661-204ENST00000549354 E7ENX8 843 aa11.12□□□□□ -0.63
LINC00661-204ENST00000549354 MATN2O00339 956 aa11.12□□□□□ -0.63
LINC00661-204ENST00000549354 GALTP07902 379 aa11.12□□□□□ -0.63
LINC00661-204ENST00000549354 MLNP12872 115 aa11.12□□□□□ -0.63
LINC00661-204ENST00000549354 SLC5A2P31639 672 aa11.12□□□□□ -0.63
LINC00661-204ENST00000549354 CD68P34810 354 aaPredicted RBP11.12□□□□□ -0.63
LINC00661-204ENST00000549354 PBX3P40426 434 aa11.12□□□□□ -0.63
LINC00661-204ENST00000549354 YAP1P46937 504 aaKnown RBP11.12□□□□□ -0.63
LINC00661-204ENST00000549354 LIMK2P53671 638 aa11.12□□□□□ -0.63
LINC00661-204ENST00000549354 PPIDQ08752 370 aaKnown RBP11.12□□□□□ -0.63
LINC00661-204ENST00000549354 GALNT2Q10471 571 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 234.7 ms