RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 PDHA1P08559 390 aa17.53■□□□□ 0.4
CD9-211ENST00000546073 ITIH2P19823 946 aa17.53■□□□□ 0.4
CD9-211ENST00000546073 KELP23276 732 aa17.53■□□□□ 0.4
CD9-211ENST00000546073 WNT3AP56704 352 aa17.53■□□□□ 0.4
CD9-211ENST00000546073 STPG1Q5TH74 334 aa17.53■□□□□ 0.4
CD9-211ENST00000546073 KYAT3Q6YP21 454 aaKnown RBP17.53■□□□□ 0.4
CD9-211ENST00000546073 Q6ZSR6 202 aa17.53■□□□□ 0.4
CD9-211ENST00000546073 ZSWIM9Q86XI8 627 aa17.53■□□□□ 0.4
CD9-211ENST00000546073 RAVER1Q8IY67 606 aaKnown RBP17.53■□□□□ 0.4
CD9-211ENST00000546073 MINDY1Q8N5J2 469 aa17.53■□□□□ 0.4
CD9-211ENST00000546073 SPATA22Q8NHS9 363 aa17.53■□□□□ 0.4
CD9-211ENST00000546073 SLC35B2Q8TB61 432 aa17.53■□□□□ 0.4
CD9-211ENST00000546073 CCDC110Q8TBZ0 833 aa17.53■□□□□ 0.4
CD9-211ENST00000546073 NUS1Q96E22 293 aa17.53■□□□□ 0.4
CD9-211ENST00000546073 OSBPL9Q96SU4 736 aa17.53■□□□□ 0.4
CD9-211ENST00000546073 HERPUD2Q9BSE4 406 aa17.53■□□□□ 0.4
CD9-211ENST00000546073 SLC32A1Q9H598 525 aa17.53■□□□□ 0.4
CD9-211ENST00000546073 C10orf88Q9H8K7 445 aa17.53■□□□□ 0.4
CD9-211ENST00000546073 FZD3Q9NPG1 666 aa17.53■□□□□ 0.4
CD9-211ENST00000546073 HACD3Q9P035 362 aa17.53■□□□□ 0.4
CD9-211ENST00000546073 SNX12Q9UMY4 172 aa17.53■□□□□ 0.4
CD9-211ENST00000546073 DRG1Q9Y295 367 aaKnown RBP17.53■□□□□ 0.4
CD9-211ENST00000546073 ZFHX2Q9C0A1 2572 aaPredicted RBP17.52■□□□□ 0.4
CD9-211ENST00000546073 CACNB4O00305 520 aaPredicted RBP17.52■□□□□ 0.4
CD9-211ENST00000546073 FZD6O60353 706 aa17.52■□□□□ 0.4
CD9-211ENST00000546073 MT-CYBP00156 380 aaPredicted RBP17.52■□□□□ 0.4
CD9-211ENST00000546073 ATP1A1P05023 1023 aaKnown RBP17.52■□□□□ 0.4
CD9-211ENST00000546073 ITGAVP06756 1048 aa17.52■□□□□ 0.4
CD9-211ENST00000546073 CASQ1P31415 396 aa17.52■□□□□ 0.4
CD9-211ENST00000546073 CCT8P50990 548 aa17.52■□□□□ 0.4
CD9-211ENST00000546073 LIMK1P53667 647 aa17.52■□□□□ 0.4
CD9-211ENST00000546073 SEMG2Q02383 582 aa17.52■□□□□ 0.4
CD9-211ENST00000546073 SLC14A1Q13336 389 aa17.52■□□□□ 0.4
CD9-211ENST00000546073 GALNT3Q14435 633 aa17.52■□□□□ 0.4
CD9-211ENST00000546073 KIF19Q2TAC6 998 aa17.52■□□□□ 0.4
CD9-211ENST00000546073 HLA-BQ31612 363 aa17.52■□□□□ 0.4
CD9-211ENST00000546073 LINC00523Q86TU6 105 aa17.52■□□□□ 0.4
CD9-211ENST00000546073 ABCA7Q8IZY2 2146 aa17.52■□□□□ 0.4
CD9-211ENST00000546073 C1orf216Q8TAB5 229 aa17.52■□□□□ 0.4
CD9-211ENST00000546073 ATG4AQ8WYN0 398 aa17.52■□□□□ 0.4
CD9-211ENST00000546073 MCCC1Q96RQ3 725 aaPredicted RBP17.52■□□□□ 0.4
CD9-211ENST00000546073 TRABDQ9H4I3 376 aa17.52■□□□□ 0.4
CD9-211ENST00000546073 ERVMER34-1Q9H9K5 563 aa17.52■□□□□ 0.4
CD9-211ENST00000546073 ZFYVE1Q9HBF4 777 aa17.52■□□□□ 0.4
CD9-211ENST00000546073 MAGEE1Q9HCI5 957 aa17.52■□□□□ 0.4
CD9-211ENST00000546073 PAK5Q9P286 719 aa17.52■□□□□ 0.4
CD9-211ENST00000546073 TCRBV7S2A1N4TA0A589 114 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 RGSL1A5PLK6 1076 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 C4orf47A7E2U8 309 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 F5H423 210 aaPredicted RBP17.51■□□□□ 0.39
CD9-211ENST00000546073 PCCBP05166 539 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 FGF1P05230 155 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 MMP2P08253 660 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 ALPIP09923 528 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 TGM1P22735 817 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 FDFT1P37268 417 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 BLKP51451 505 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 CLDN2P57739 230 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 PDE1BQ01064 536 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 MTM1Q13496 603 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 AGERQ15109 404 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 QPCTQ16769 361 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 LRRC66Q68CR7 880 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 DRICH1Q6PGQ1 229 aaPredicted RBP17.51■□□□□ 0.39
CD9-211ENST00000546073 NRSN1Q8IZ57 195 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 SLC25A41Q8N5S1 370 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 TMEM145Q8NBT3 493 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 GRK7Q8WTQ7 553 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 MAGOHBQ96A72 148 aaKnown RBP17.51■□□□□ 0.39
CD9-211ENST00000546073 ELF4Q99607 663 aaPredicted RBP17.51■□□□□ 0.39
CD9-211ENST00000546073 RTKNQ9BST9 563 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 CDH19Q9H159 772 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 LRRC40Q9H9A6 602 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 EBF2Q9HAK2 575 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 USP29Q9HBJ7 922 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 R3HDM2Q9Y2K5 976 aaKnown RBP17.51■□□□□ 0.39
CD9-211ENST00000546073 COQ6Q9Y2Z9 468 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 SNX11Q9Y5W9 270 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 SAR1BQ9Y6B6 198 aa17.51■□□□□ 0.39
CD9-211ENST00000546073 NPIPB15A6NHN6 443 aaPredicted RBP17.5■□□□□ 0.39
CD9-211ENST00000546073 GOLGA8CPA6NN73 597 aa17.5■□□□□ 0.39
CD9-211ENST00000546073 ERI2A8K979 691 aaKnown RBP17.5■□□□□ 0.39
CD9-211ENST00000546073 TSHRP16473 764 aa17.5■□□□□ 0.39
CD9-211ENST00000546073 PSMB4P28070 264 aa17.5■□□□□ 0.39
CD9-211ENST00000546073 CD68P34810 354 aaPredicted RBP17.5■□□□□ 0.39
CD9-211ENST00000546073 NXPH1P58417 271 aa17.5■□□□□ 0.39
CD9-211ENST00000546073 PDE1CQ14123 709 aaPredicted RBP17.5■□□□□ 0.39
CD9-211ENST00000546073 CNGA3Q16281 694 aa17.5■□□□□ 0.39
CD9-211ENST00000546073 ZDHHC20Q5W0Z9 365 aa17.5■□□□□ 0.39
CD9-211ENST00000546073 CRTC1Q6UUV9 634 aa17.5■□□□□ 0.39
CD9-211ENST00000546073 ABI3BPQ7Z7G0 1075 aa17.5■□□□□ 0.39
CD9-211ENST00000546073 RASGEF1CQ8N431 466 aa17.5■□□□□ 0.39
CD9-211ENST00000546073 ACTRT1Q8TDG2 376 aa17.5■□□□□ 0.39
CD9-211ENST00000546073 BTN2A2Q8WVV5 523 aa17.5■□□□□ 0.39
CD9-211ENST00000546073 CENPTQ96BT3 561 aa17.5■□□□□ 0.39
CD9-211ENST00000546073 ORAI3Q9BRQ5 295 aa17.5■□□□□ 0.39
CD9-211ENST00000546073 FICDQ9BVA6 458 aa17.5■□□□□ 0.39
CD9-211ENST00000546073 PHPT1Q9NRX4 125 aaPredicted RBP17.5■□□□□ 0.39
CD9-211ENST00000546073 TM7SF3Q9NS93 570 aa17.5■□□□□ 0.39
CD9-211ENST00000546073 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms