RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 POPDC3Q9HBV1 291 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 ARNT2Q9HBZ2 717 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 FAM49BQ9NUQ9 324 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 SLC38A7Q9NVC3 462 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 TBC1D13Q9NVG8 400 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 GID8Q9NWU2 228 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 UBAP1Q9NZ09 502 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 CD300AQ9UGN4 299 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 CROTQ9UKG9 612 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 SLC39A10Q9ULF5 831 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 RIMKLBQ9ULI2 386 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 MTF2Q9Y483 593 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-225ENST00000545920 PCDHGC4Q9Y5F7 938 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 COPG1Q9Y678 874 aaKnown RBP6.51□□□□□ -1.37
SNHG1-225ENST00000545920 ANK1P16157 1881 aa6.51□□□□□ -1.37
SNHG1-225ENST00000545920 NRCAMQ92823 1304 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 COL11A1P12107 1806 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-225ENST00000545920 RALGAPA2Q2PPJ7 1873 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 SMIM35A0A1B0GVV1 85 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 M0QYT0 321 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 PSMD12O00232 456 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-225ENST00000545920 SDHDO14521 159 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 GABRDO14764 452 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 DLX3O60479 287 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 SNAP91O60641 907 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 GPC4O75487 556 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 USP2O75604 605 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-225ENST00000545920 CNMDO75829 334 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 DNAJB5O75953 348 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 IPO13O94829 963 aaKnown RBP6.5□□□□□ -1.37
SNHG1-225ENST00000545920 MATN4O95460 622 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 TOP3BO95985 862 aaKnown RBP6.5□□□□□ -1.37
SNHG1-225ENST00000545920 RPLP2P05387 115 aaKnown RBP6.5□□□□□ -1.37
SNHG1-225ENST00000545920 GPIP06744 558 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 FGF4P08620 206 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 LCP1P13796 627 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 ENO3P13929 434 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-225ENST00000545920 IL10P22301 178 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 MYF6P23409 242 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 ITPKAP23677 461 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 HOXC13P31276 330 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 CXCR3P49682 368 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 NAGLUP54802 743 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 NME5P56597 212 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 DAOAP59103 153 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 PFKPQ01813 784 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 SRSF11Q05519 484 aaKnown RBP6.5□□□□□ -1.37
SNHG1-225ENST00000545920 TNK2Q07912 1038 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 ADIGQ0VDE8 80 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 LRP8Q14114 963 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 IKBKEQ14164 716 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 GRM3Q14832 879 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 GRIN2CQ14957 1233 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 GRIK4Q16099 956 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 LRRC36Q1X8D7 754 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 MYLK3Q32MK0 819 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 ZBED5Q49AG3 693 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 AASDHQ4L235 1098 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-225ENST00000545920 RAB6CQ53S08 254 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 RAB41Q5JT25 222 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 GLRA4Q5JXX5 417 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 SYCP2LQ5T4T6 812 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 VWA5B1Q5TIE3 1220 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 OTUD1Q5VV17 481 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-225ENST00000545920 NXNQ6DKJ4 435 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 C8orf82Q6P1X6 216 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-225ENST00000545920 LYPD4Q6UWN0 246 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 CATSPER4Q7RTX7 472 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 DHFR2Q86XF0 187 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 PLD6Q8N2A8 252 aaKnown RBP6.5□□□□□ -1.37
SNHG1-225ENST00000545920 FSTL5Q8N475 847 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-225ENST00000545920 C7orf31Q8N865 590 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 ZNF513Q8N8E2 541 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-225ENST00000545920 OR2T34Q8NGX1 318 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 OR2T3Q8NH03 318 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 SLC2A14Q8TDB8 520 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 ZNF296Q8WUU4 475 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-225ENST00000545920 FAM149B1Q96BN6 582 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 NMD3Q96D46 503 aaKnown RBP6.5□□□□□ -1.37
SNHG1-225ENST00000545920 L3HYPDHQ96EM0 354 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 CPB2Q96IY4 423 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 VPS50Q96JG6 964 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 FEM1CQ96JP0 617 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 GPR78Q96P69 363 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 IL12RB2Q99665 862 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 PKP2Q99959 881 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 TBL1YQ9BQ87 522 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 B3GNT5Q9BYG0 378 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 BHLHE41Q9C0J9 482 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-225ENST00000545920 RAB6CQ9H0N0 254 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 TRPV6Q9H1D0 765 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 CCDC68Q9H2F9 335 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 ADAMTS10Q9H324 1103 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 CATSPERBQ9H7T0 1116 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 COPS7BQ9H9Q2 264 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-225ENST00000545920 LIN7BQ9HAP6 207 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 WDR6Q9NNW5 1121 aaKnown RBP6.5□□□□□ -1.37
SNHG1-225ENST00000545920 IARS2Q9NSE4 1012 aaKnown RBP6.5□□□□□ -1.37
SNHG1-225ENST00000545920 CCM2LQ9NUG4 571 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-225ENST00000545920 NDFIP2Q9NV92 336 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms