RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ANAPC15P60006 121 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 MYL6P60660 151 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 YWHAGP61981 247 aaKnown RBP eCLIP4.17□□□□□ -1.74
SNHG1-220ENST00000544550 SNRPFP62306 86 aaKnown RBP4.17□□□□□ -1.74
SNHG1-220ENST00000544550 ZFP36L1Q07352 338 aaKnown RBP4.17□□□□□ -1.74
SNHG1-220ENST00000544550 CDC20Q12834 499 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 CNTN1Q12860 1018 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 BIRC3Q13489 604 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 PDE1CQ14123 709 aaPredicted RBP4.17□□□□□ -1.74
SNHG1-220ENST00000544550 FZD2Q14332 565 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 SNRNP35Q16560 246 aaKnown RBP4.17□□□□□ -1.74
SNHG1-220ENST00000544550 ZNF284Q2VY69 593 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 ZNF542PQ5EBM4 170 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 PIK3R6Q5UE93 754 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 KIAA1161Q6NSJ0 714 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 LVRNQ6Q4G3 990 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 SCARA5Q6ZMJ2 495 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 GCNT7Q6ZNI0 430 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 BRAPQ7Z569 592 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 B3GNT8Q7Z7M8 397 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 WFDC3Q8IUB2 231 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 CCDC103Q8IW40 242 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 PPIL6Q8IXY8 311 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 SLC35F3Q8IY50 421 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 CCDC13Q8IYE1 715 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 SDR16C5Q8N3Y7 309 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 FSTL5Q8N475 847 aaPredicted RBP4.17□□□□□ -1.74
SNHG1-220ENST00000544550 CARNMT1Q8N4J0 409 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 C12orf29Q8N999 325 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 TMEM52Q8NDY8 209 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 CPT1CQ8TCG5 803 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 TAF4BQ92750 862 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 AZIN2Q96A70 460 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 KIAA1143Q96AT1 154 aaPredicted RBP4.17□□□□□ -1.74
SNHG1-220ENST00000544550 CCDC127Q96BQ5 260 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 CYFIP2Q96F07 1278 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 SLC45A3Q96JT2 553 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 LMLNQ96KR4 655 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 CCDC114Q96M63 670 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 PTCHD1Q96NR3 888 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 MYOCQ99972 504 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 ZFYVE21Q9BQ24 234 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 LLPHQ9BRT6 129 aaKnown RBP4.17□□□□□ -1.74
SNHG1-220ENST00000544550 CDADC1Q9BWV3 514 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 DUSP16Q9BY84 665 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 CPEB1Q9BZB8 566 aaKnown RBP4.17□□□□□ -1.74
SNHG1-220ENST00000544550 SLC29A3Q9BZD2 475 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 UBXN6Q9BZV1 441 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 SLC13A1Q9BZW2 595 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 INTS2Q9H0H0 1204 aaKnown RBP4.17□□□□□ -1.74
SNHG1-220ENST00000544550 IKZF4Q9H2S9 585 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 LRRN3Q9H3W5 708 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 FZD3Q9NPG1 666 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 DYRK4Q9NR20 520 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 FAM49BQ9NUQ9 324 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 ERVK13-1Q9NX77 482 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 FOXJ2Q9P0K8 574 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 CCDC39Q9UFE4 941 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 APOBEC3BQ9UH17 382 aaKnown RBP4.17□□□□□ -1.74
SNHG1-220ENST00000544550 KCTD3Q9Y597 815 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 PCDHGA3Q9Y5H0 932 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 MGAQ8IWI9 3026 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 CKAP5Q14008 2032 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 TCHHQ07283 1943 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 MYLKQ15746 1914 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 GON4LQ3T8J9 2241 aa4.17□□□□□ -1.74
SNHG1-220ENST00000544550 PLXNA2O75051 1894 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 BSNQ9UPA5 3926 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 TRBV23OR9-2A0A075B6M9 112 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 HEATR9A2RTY3 570 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 AQP7O14520 342 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 TOR1BO14657 336 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 FPGTO14772 594 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 HGSO14964 777 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-220ENST00000544550 MCF2LO15068 1137 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 ACSL4O60488 711 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 DNAJC8O75937 253 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-220ENST00000544550 PCDH8O95206 1070 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 LUC7L3O95232 432 aaKnown RBP4.16□□□□□ -1.74
SNHG1-220ENST00000544550 MED26O95402 600 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 CLDN1O95832 211 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 BMP15O95972 392 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 ZBED1O96006 694 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 RPN1P04843 607 aaKnown RBP4.16□□□□□ -1.74
SNHG1-220ENST00000544550 ALPIP09923 528 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 LIFP15018 202 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 PNLIPP16233 465 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 MAN1A1P33908 653 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 LEPRP48357 1165 aaKnown RBP4.16□□□□□ -1.74
SNHG1-220ENST00000544550 SGSHP51688 502 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 GP2P55259 537 aaKnown RBP4.16□□□□□ -1.74
SNHG1-220ENST00000544550 ADKP55263 362 aaKnown RBP4.16□□□□□ -1.74
SNHG1-220ENST00000544550 CLDN2P57739 230 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 TAS2R38P59533 333 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 RPS21P63220 83 aaKnown RBP4.16□□□□□ -1.74
SNHG1-220ENST00000544550 CCL7P80098 99 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 CYP24A1Q07973 514 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 INCA1Q0VD86 236 aa4.16□□□□□ -1.74
SNHG1-220ENST00000544550 DRAP1Q14919 205 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-220ENST00000544550 ELOCQ15369 112 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms