RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 STYK1Q6J9G0 422 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 PMF1Q6P1K2 205 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 CATSPER4Q7RTX7 472 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 PAGE2Q7Z2X7 111 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 SPRED1Q7Z699 444 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 LINC00523Q86TU6 105 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 OSTM1Q86WC4 334 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 ARMC8Q8IUR7 673 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 CCDC185Q8N715 623 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 PSD4Q8NDX1 1056 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 HDAC11Q96DB2 347 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 HOXD1Q9GZZ0 328 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 PRDM12Q9H4Q4 367 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 NEK6Q9HC98 313 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 TMPRSS4Q9NRS4 437 aa12.71□□□□□ -0.37
SMG8-202ENST00000543872 ZCWPW2A0A1B0GU75 182 aa12.71□□□□□ -0.38
SMG8-202ENST00000543872 AQP12BA6NM10 295 aa12.71□□□□□ -0.38
SMG8-202ENST00000543872 H0Y858 1186 aa12.71□□□□□ -0.38
SMG8-202ENST00000543872 ANGPT2O15123 496 aa12.71□□□□□ -0.38
SMG8-202ENST00000543872 UGT2B4P06133 528 aa12.71□□□□□ -0.38
SMG8-202ENST00000543872 NMBRP28336 390 aa12.71□□□□□ -0.38
SMG8-202ENST00000543872 AXLP30530 894 aa12.71□□□□□ -0.38
SMG8-202ENST00000543872 BMPR1AP36894 532 aa12.71□□□□□ -0.38
SMG8-202ENST00000543872 PTGER2P43116 358 aa12.71□□□□□ -0.38
SMG8-202ENST00000543872 HK2P52789 917 aa12.71□□□□□ -0.38
SMG8-202ENST00000543872 PCSK7Q16549 785 aa12.71□□□□□ -0.38
SMG8-202ENST00000543872 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.71□□□□□ -0.38
SMG8-202ENST00000543872 CDAN1Q8IWY9 1227 aa12.71□□□□□ -0.38
SMG8-202ENST00000543872 AQP12AQ8IXF9 295 aa12.71□□□□□ -0.38
SMG8-202ENST00000543872 SP8Q8IXZ3 490 aa12.71□□□□□ -0.38
SMG8-202ENST00000543872 CENPLQ8N0S6 344 aaPredicted RBP12.71□□□□□ -0.38
SMG8-202ENST00000543872 TTC30BQ8N4P2 665 aa12.71□□□□□ -0.38
SMG8-202ENST00000543872 NDNFQ8TB73 568 aa12.71□□□□□ -0.38
SMG8-202ENST00000543872 FTHL17Q9BXU8 183 aa12.71□□□□□ -0.38
SMG8-202ENST00000543872 DNAI2Q9GZS0 605 aa12.71□□□□□ -0.38
SMG8-202ENST00000543872 OSBPL2Q9H1P3 480 aa12.71□□□□□ -0.38
SMG8-202ENST00000543872 RMND5AQ9H871 391 aa12.71□□□□□ -0.38
SMG8-202ENST00000543872 DDX28Q9NUL7 540 aaKnown RBP12.71□□□□□ -0.38
SMG8-202ENST00000543872 A0A0J9YYE9 177 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 ZSCAN5BA6NJL1 495 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 KMOO15229 486 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 OGTO15294 1046 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 ICMTO60725 284 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 HUS1O60921 280 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 SLC35E2BP0CK96 405 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 BDNFP23560 247 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 NR2C2P49116 596 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 VBP1P61758 197 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 PHC1P78364 1004 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 SLC12A1Q13621 1099 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 CAPSQ13938 189 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 RPS6KA2Q15349 733 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 FAM83EQ2M2I3 478 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 TMEM192Q8IY95 271 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 ESX1Q8N693 406 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 PNPT1Q8TCS8 783 aaKnown RBP12.7□□□□□ -0.38
SMG8-202ENST00000543872 MYRFLQ96LU7 910 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 ZBED2Q9BTP6 218 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 C1QTNF1Q9BXJ1 281 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 SPON1Q9HCB6 807 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 ARIH1Q9Y4X5 557 aaPredicted RBP12.7□□□□□ -0.38
SMG8-202ENST00000543872 TMCC2O75069 709 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 HOXC6P09630 235 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 CXCL8P10145 99 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 NDST1P52848 882 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 TUBA1BP68363 451 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 DGCR6Q14129 220 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 CSHL1Q14406 222 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 GOLGA7BQ2TAP0 167 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 RABL3Q5HYI8 236 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 TSTD2Q5T7W7 516 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 NEK10Q6ZWH5 1172 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 TUBA1AQ71U36 451 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 FUNDC1Q8IVP5 155 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 AFAP1L2Q8N4X5 818 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 RDH11Q8TC12 318 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 CLEC4CQ8WTT0 213 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 S100ZQ8WXG8 99 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 ZUFSPQ96AP4 578 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 TBCBQ99426 244 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 C17orf80Q9BSJ5 609 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 CMTM6Q9NX76 183 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 SARDHQ9UL12 918 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 SCAF8Q9UPN6 1271 aaKnown RBP12.7□□□□□ -0.38
SMG8-202ENST00000543872 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.7□□□□□ -0.38
SMG8-202ENST00000543872 CRYZL1O95825 349 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 FYNP06241 537 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 GFAPP14136 432 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 RFC2P35250 354 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 PPP1R8Q12972 351 aaKnown RBP12.7□□□□□ -0.38
SMG8-202ENST00000543872 TUBA3CQ13748 450 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 LRIT3Q3SXY7 679 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 FAM45BPQ6NSW5 357 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 CUZD1Q86UP6 607 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 CEP97Q8IW35 865 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 CCDC103Q8IW40 242 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 DENND6AQ8IWF6 608 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 ATP6V0D2Q8N8Y2 350 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 FAM45AQ8TCE6 357 aa12.7□□□□□ -0.38
SMG8-202ENST00000543872 ALOXE3Q9BYJ1 711 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms