RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 IFNA4P05014 189 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 JUNP05412 331 aaKnown RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 ZNF865P0CJ78 1059 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 HSMCR30P0CW71 290 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 SRGNP10124 158 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 HSPD1P10809 573 aaKnown RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 MCF2P10911 925 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 SRCP12931 536 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 SLC5A1P13866 664 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 FDPSP14324 419 aaKnown RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 GJA1P17302 382 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 ITIH2P19823 946 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 NCF2P19878 526 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 S100PP25815 95 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 PIK3R1P27986 724 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 GRK3P35626 688 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 GNALP38405 381 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 IL6STP40189 918 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 HNF4AP41235 474 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 MAGEA1P43355 309 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 ALDH1A3P47895 512 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 LEPRP48357 1165 aaKnown RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 RAB13P51153 203 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 DGKQP52824 942 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 NDST1P52848 882 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 AQP4P55087 323 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 NLRP11P59045 1033 aaKnown RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 MYL6P60660 151 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 COPZ1P61923 177 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 SUMO1P63165 101 aaKnown RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 NKX3-2P78367 333 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 POU6F2P78424 691 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 MRPS9P82933 396 aaKnown RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 TNFAIP2Q03169 654 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 GALNT2Q10471 571 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 ILF2Q12905 390 aaKnown RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 BNIP2Q12982 314 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 SNTA1Q13424 505 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 PNOCQ13519 176 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 GCKRQ14397 625 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 CAPRIN1Q14444 709 aaKnown RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 PDK2Q15119 407 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 KRT31Q15323 416 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 ANGPT1Q15389 498 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 DLGAP5Q15398 846 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 RPS6KA1Q15418 735 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 TRIP10Q15642 601 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 TRIP13Q15645 432 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 TAB1Q15750 504 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 PFKFB4Q16877 469 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 TWISTNBQ3B726 338 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 TKFCQ3LXA3 575 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 ZFP69Q49AA0 526 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 KLHL12Q53G59 568 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 SFT2D3Q587I9 215 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 FAM47CQ5HY64 1035 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 DGKKQ5KSL6 1271 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 PXDC1Q5TGL8 231 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 RSBN1Q5VWQ0 802 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 TIGD3Q6B0B8 471 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 ITPRIPL1Q6GPH6 555 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 KRT80Q6KB66 452 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 OGFOD2Q6N063 350 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 ANKRD26P1Q6NSI1 321 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 CGB2Q6NT52 195 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 GPAT2Q6NUI2 795 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 TTI2Q6NXR4 508 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 ZNF530Q6P9A1 599 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 IYDQ6PHW0 289 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 WDR59Q6PJI9 974 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 FOXR2Q6PJQ5 311 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 CNSTQ6PJW8 725 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 NSMFQ6X4W1 530 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 KIAA0408Q6ZU52 694 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 TOM1L2Q6ZVM7 507 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 PRSS42Q7Z5A4 293 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 ANKS1BQ7Z6G8 1248 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 MILR1Q7Z6M3 343 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 ZER1Q7Z7L7 766 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 SLC9B2Q86UD5 537 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 IGFN1Q86VF2 1251 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 C2CD5Q86YS7 1000 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 THNSL1Q8IYQ7 743 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 ULK2Q8IYT8 1036 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 SIX6OS1Q8N1H7 587 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 CLEC4FQ8N1N0 589 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 GALNT4Q8N4A0 578 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 FIBCD1Q8N539 461 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 ARFGAP1Q8N6T3 406 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 USHBP1Q8N6Y0 703 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 PACRGLQ8N7B6 248 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 C12orf29Q8N999 325 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 PIK3C3Q8NEB9 887 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 OR4D10Q8NGI6 311 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 OR2W6PQ8NHA6 318 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 ZNF461Q8TAF7 563 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 PHOSPHO2Q8TCD6 241 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 DTX3LQ8TDB6 740 aa4.36□□□□□ -1.71
SNHG1-219ENST00000542112 SH3RF3Q8TEJ3 882 aaPredicted RBP4.36□□□□□ -1.71
SNHG1-219ENST00000542112 U2AF1L4Q8WU68 220 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms