RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 IGKV6-21A0A0C4DH24 114 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 EVPLLA8MZ36 301 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 TBC1D4O60343 1298 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 TNFAIP8O95379 198 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 FGF3P11487 239 aaPredicted RBP16.14■□□□□ 0.17
VARS2-212ENST00000542001 UQCRBP14927 111 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 MC4RP32245 332 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 RPL38P63173 70 aaKnown RBP16.14■□□□□ 0.17
VARS2-212ENST00000542001 SATL1Q86VE3 508 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 DACH2Q96NX9 599 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 PAIP1Q9H074 479 aaKnown RBP16.14■□□□□ 0.17
VARS2-212ENST00000542001 EXOSC4Q9NPD3 245 aaKnown RBP16.14■□□□□ 0.17
VARS2-212ENST00000542001 SH3BP4Q9P0V3 963 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 SCHIP1Q9P0W5 487 aaPredicted RBP16.14■□□□□ 0.17
VARS2-212ENST00000542001 COL1A2P08123 1366 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 A0A0U1RQS6 177 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 C1orf232A0A0U1RR37 186 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 MANSC4A6NHS7 340 aaPredicted RBP16.14■□□□□ 0.17
VARS2-212ENST00000542001 ZBTB42B2RXF5 422 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 LDLRP01130 860 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 ITGAXP20702 1163 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 CREB5Q02930 508 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 LAMB3Q13751 1172 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 MBLAC2Q68D91 279 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 UBR7Q8N806 425 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 FAM120BQ96EK7 910 aaKnown RBP16.14■□□□□ 0.17
VARS2-212ENST00000542001 IGSF9Q9P2J2 1179 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 RCOR3Q9P2K3 495 aaPredicted RBP16.14■□□□□ 0.17
VARS2-212ENST00000542001 CCDC189A1A4V9 331 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 E7ESA3 106 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 TRIM38O00635 465 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 MYO1DO94832 1006 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 SNUPNO95149 360 aaKnown RBP16.14■□□□□ 0.17
VARS2-212ENST00000542001 PFKMP08237 780 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 RPL9P32969 192 aaKnown RBP16.14■□□□□ 0.17
VARS2-212ENST00000542001 KCNQ1P51787 676 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 COL9A2Q14055 689 aaPredicted RBP16.14■□□□□ 0.17
VARS2-212ENST00000542001 ZNF598Q86UK7 904 aaKnown RBP16.14■□□□□ 0.17
VARS2-212ENST00000542001 MICU2Q8IYU8 434 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 MRPS31Q92665 395 aaKnown RBP16.14■□□□□ 0.17
VARS2-212ENST00000542001 SIKE1Q9BRV8 207 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 ADAMTS5Q9UNA0 930 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 PSMD13Q9UNM6 376 aa16.14■□□□□ 0.17
VARS2-212ENST00000542001 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.13■□□□□ 0.17
VARS2-212ENST00000542001 HS6ST1O60243 411 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 STARD3Q14849 445 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 PPP1R3AQ16821 1122 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 ZNF792Q3KQV3 632 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 KBTBD7Q8WVZ9 684 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 SKA1Q96BD8 255 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 RPL10LQ96L21 214 aaKnown RBP16.13■□□□□ 0.17
VARS2-212ENST00000542001 MLPHQ9BV36 600 aaPredicted RBP16.13■□□□□ 0.17
VARS2-212ENST00000542001 ARL15Q9NXU5 204 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 GNG14A0A1W2PPG7 69 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 ZNF197O14709 1029 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 AURKAO14965 403 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 TBL1XO60907 577 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 IL5RAQ01344 420 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 SREBF2Q12772 1141 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 CENPLQ8N0S6 344 aaPredicted RBP16.13■□□□□ 0.17
VARS2-212ENST00000542001 TAGAPQ8N103 731 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 OR56A4Q8NGH8 313 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 RTKNQ9BST9 563 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 C20orf27Q9GZN8 174 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 AGO1Q9UL18 857 aaKnown RBP16.13■□□□□ 0.17
VARS2-212ENST00000542001 TMEM114B3SHH9 223 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 PDLIM1O00151 329 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 MATN3O15232 486 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 ZNF189O75820 626 aaPredicted RBP16.13■□□□□ 0.17
VARS2-212ENST00000542001 GOT2P00505 430 aaKnown RBP16.13■□□□□ 0.17
VARS2-212ENST00000542001 MAP3K10Q02779 954 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 ENPEPQ07075 957 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 INSCQ1MX18 579 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 CACHD1Q5VU97 1274 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 ZYG11AQ6WRX3 759 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 ZC3HC1Q86WB0 502 aaKnown RBP16.13■□□□□ 0.17
VARS2-212ENST00000542001 RELL1Q8IUW5 271 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 ACVR1CQ8NER5 493 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 TSPAN14Q8NG11 270 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 ZC3H15Q8WU90 426 aaKnown RBP16.13■□□□□ 0.17
VARS2-212ENST00000542001 MYRFQ9Y2G1 1151 aa16.13■□□□□ 0.17
VARS2-212ENST00000542001 LRG1P02750 347 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 CNPP09543 421 aaKnown RBP16.12■□□□□ 0.17
VARS2-212ENST00000542001 ZBTB48P10074 688 aaPredicted RBP16.12■□□□□ 0.17
VARS2-212ENST00000542001 WARSP23381 471 aaKnown RBP16.12■□□□□ 0.17
VARS2-212ENST00000542001 CCNFP41002 786 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 ATP1A4Q13733 1029 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 CLYBLQ8N0X4 340 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 SOCS4Q8WXH5 440 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 SEPT8Q92599 483 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 ANKRD27Q96NW4 1050 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 KCNA7Q96RP8 456 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 SIRPGQ9P1W8 387 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 EVPLQ92817 2033 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 LRRC14BA6NHZ5 514 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 GRIK3Q13003 919 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 SFT2D3Q587I9 215 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 VARS2Q5ST30 1063 aaKnown RBP16.12■□□□□ 0.17
VARS2-212ENST00000542001 SPESP1Q6UW49 350 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 CPNE9Q8IYJ1 553 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms