RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 NME1P15531 152 aaKnown RBP15.11■□□□□ 0.01
UBE3B-212ENST00000540230 CD86P42081 329 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 SKOR1P84550 965 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 INAVAQ3KP66 663 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 DENND2CQ68D51 928 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 AADACL2Q6P093 401 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 HSD11B1LQ7Z5J1 315 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 RAB44Q7Z6P3 723 aaPredicted RBP15.11■□□□□ 0.01
UBE3B-212ENST00000540230 RCOR2Q8IZ40 523 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 EXD1Q8NHP7 514 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 ALG3Q92685 438 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 IFT43Q96FT9 208 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 SCRN2Q96FV2 425 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 CNDP2Q96KP4 475 aaKnown RBP15.11■□□□□ 0.01
UBE3B-212ENST00000540230 COQ10AQ96MF6 247 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 AGAP3Q96P47 875 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 HEMGNQ9BXL5 484 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 PPIL1Q9Y3C6 166 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 PCDHA3Q9Y5H8 950 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 CHD8Q9HCK8 2581 aa15.11■□□□□ 0.01
UBE3B-212ENST00000540230 TPRP12270 2363 aaKnown RBP15.1■□□□□ 0.01
UBE3B-212ENST00000540230 K7ESM1 405 aa15.1■□□□□ 0.01
UBE3B-212ENST00000540230 ENC1O14682 589 aa15.1■□□□□ 0.01
UBE3B-212ENST00000540230 FFAR2O15552 330 aa15.1■□□□□ 0.01
UBE3B-212ENST00000540230 LDOC1O95751 146 aaPredicted RBP15.1■□□□□ 0.01
UBE3B-212ENST00000540230 TGM2P21980 687 aa15.1■□□□□ 0.01
UBE3B-212ENST00000540230 CTNNA2P26232 953 aa15.1■□□□□ 0.01
UBE3B-212ENST00000540230 HNF1BP35680 557 aa15.1■□□□□ 0.01
UBE3B-212ENST00000540230 PEX5P50542 639 aa15.1■□□□□ 0.01
UBE3B-212ENST00000540230 THOP1P52888 689 aa15.1■□□□□ 0.01
UBE3B-212ENST00000540230 YPEL5P62699 121 aa15.1■□□□□ 0.01
UBE3B-212ENST00000540230 TFDP2Q14188 446 aa15.1■□□□□ 0.01
UBE3B-212ENST00000540230 ACOX1Q15067 660 aa15.1■□□□□ 0.01
UBE3B-212ENST00000540230 PRKD1Q15139 912 aaPredicted RBP15.1■□□□□ 0.01
UBE3B-212ENST00000540230 CCDC157Q569K6 752 aa15.1■□□□□ 0.01
UBE3B-212ENST00000540230 MACC1Q6ZN28 852 aa15.1■□□□□ 0.01
UBE3B-212ENST00000540230 RFLNAQ6ZTI6 216 aa15.1■□□□□ 0.01
UBE3B-212ENST00000540230 NT5DC3Q86UY8 548 aa15.1■□□□□ 0.01
UBE3B-212ENST00000540230 CBARPQ8N350 705 aaPredicted RBP15.1■□□□□ 0.01
UBE3B-212ENST00000540230 ZNF548Q8NEK5 533 aaPredicted RBP15.1■□□□□ 0.01
UBE3B-212ENST00000540230 KIAA1524Q8TCG1 905 aa15.1■□□□□ 0.01
UBE3B-212ENST00000540230 ADAMTS14Q8WXS8 1223 aa15.1■□□□□ 0.01
UBE3B-212ENST00000540230 RBM41Q96IZ5 413 aaKnown RBP15.1■□□□□ 0.01
UBE3B-212ENST00000540230 CNTNAP3BQ96NU0 1288 aa15.1■□□□□ 0.01
UBE3B-212ENST00000540230 APOOQ9BUR5 198 aa15.1■□□□□ 0.01
UBE3B-212ENST00000540230 CNTNAP3Q9BZ76 1288 aa15.1■□□□□ 0.01
UBE3B-212ENST00000540230 PACSIN2Q9UNF0 486 aaPredicted RBP15.1■□□□□ 0.01
UBE3B-212ENST00000540230 CEP295Q9C0D2 2601 aa15.09■□□□□ 0.01
UBE3B-212ENST00000540230 A0A0J9YYE9 177 aa15.09■□□□□ 0.01
UBE3B-212ENST00000540230 SIGLEC6O43699 453 aa15.09■□□□□ 0.01
UBE3B-212ENST00000540230 TRBC1P01850 177 aa15.09■□□□□ 0.01
UBE3B-212ENST00000540230 JUNDP17535 347 aa15.09■□□□□ 0.01
UBE3B-212ENST00000540230 ETV3P41162 512 aa15.09■□□□□ 0.01
UBE3B-212ENST00000540230 HNRNPKP61978 463 aaKnown RBP eCLIP15.09■□□□□ 0.01
UBE3B-212ENST00000540230 MTM1Q13496 603 aa15.09■□□□□ 0.01
UBE3B-212ENST00000540230 PPP2R5EQ16537 467 aa15.09■□□□□ 0.01
UBE3B-212ENST00000540230 USP45Q70EL2 814 aa15.09■□□□□ 0.01
UBE3B-212ENST00000540230 ZC3H18Q86VM9 953 aaKnown RBP15.09■□□□□ 0.01
UBE3B-212ENST00000540230 PHACTR4Q8IZ21 702 aa15.09■□□□□ 0.01
UBE3B-212ENST00000540230 LPCAT1Q8NF37 534 aa15.09■□□□□ 0.01
UBE3B-212ENST00000540230 RBM15Q96T37 977 aaKnown RBP eCLIP15.09■□□□□ 0.01
UBE3B-212ENST00000540230 BRD8Q9H0E9 1235 aa15.09■□□□□ 0.01
UBE3B-212ENST00000540230 PCDH9Q9HC56 1237 aa15.09■□□□□ 0.01
UBE3B-212ENST00000540230 APOBEC2Q9Y235 224 aaKnown RBP15.09■□□□□ 0.01
UBE3B-212ENST00000540230 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.09■□□□□ 0.01
UBE3B-212ENST00000540230 CAPN6Q9Y6Q1 641 aa15.09■□□□□ 0.01
UBE3B-212ENST00000540230 PLXNB3Q9ULL4 1909 aa15.09■□□□□ 0.01
UBE3B-212ENST00000540230 ACACBO00763 2458 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 SCAMP1O15126 338 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 FTCDO95954 541 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 CELA2BP08218 269 aaPredicted RBP15.08■□□□□ 0.01
UBE3B-212ENST00000540230 C1SP09871 688 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 CYP2A6P11509 494 aaPredicted RBP15.08■□□□□ 0.01
UBE3B-212ENST00000540230 MYF5P13349 255 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 CES1P23141 567 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 PTPN3P26045 913 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 CD68P34810 354 aaPredicted RBP15.08■□□□□ 0.01
UBE3B-212ENST00000540230 NR2C2P49116 596 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 ACADVLP49748 655 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 CLDN6P56747 220 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 WASHC5Q12768 1159 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 KIF5AQ12840 1032 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 C1orf61Q13536 156 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 NFATC4Q14934 902 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 PROX2Q3B8N5 592 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 LRRC66Q68CR7 880 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 ESRP1Q6NXG1 681 aaKnown RBP15.08■□□□□ 0.01
UBE3B-212ENST00000540230 CRTC1Q6UUV9 634 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 Q6ZVL8 140 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 BBS12Q6ZW61 710 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 MARCH9Q86YJ5 346 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 OR4C6Q8NH72 309 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 SPATA22Q8NHS9 363 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 P3H4Q92791 437 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 TSACCQ96A04 125 aaPredicted RBP15.08■□□□□ 0.01
UBE3B-212ENST00000540230 NUS1Q96E22 293 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 DTD2Q96FN9 168 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 LRRC61Q9BV99 259 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 LGR4Q9BXB1 951 aa15.08■□□□□ 0.01
UBE3B-212ENST00000540230 C10orf88Q9H8K7 445 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms