RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 CCDC187A0A096LP49 1063 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 OR6C76A6NM76 312 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 CCDC169A6NNP5 214 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 ZNF785A8K8V0 405 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 M0QYG6 137 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 UBXN8O00124 270 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 AP3B1O00203 1094 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 CACNB4O00305 520 aaPredicted RBP6.18□□□□□ -1.42
MRE11-209ENST00000540013 ZNF185O15231 689 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 PRPF4O43172 522 aaKnown RBP eCLIP6.18□□□□□ -1.42
MRE11-209ENST00000540013 RIPK2O43353 540 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 TSC22D2O75157 780 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 NCR1O76036 304 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 TPPPO94811 219 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 GPANK1O95872 356 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 RB1P06400 928 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 CASTP20810 708 aaKnown RBP6.18□□□□□ -1.42
MRE11-209ENST00000540013 SLC6A2P23975 617 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 TTKP33981 857 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 DEKP35659 375 aaKnown RBP6.18□□□□□ -1.42
MRE11-209ENST00000540013 IFNAR2P48551 515 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 TRPC1P48995 793 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 STAT2P52630 851 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 ZNF844Q08AG5 666 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 HYAL4Q2M3T9 481 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 BEAN1Q3B7T3 259 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 HSP90AA5PQ58FG0 334 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 LY6G5CQ5SRR4 150 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 HMBOX1Q6NT76 420 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 MEX3BQ6ZN04 569 aaKnown RBP6.18□□□□□ -1.42
MRE11-209ENST00000540013 PARS2Q7L3T8 475 aaKnown RBP6.18□□□□□ -1.42
MRE11-209ENST00000540013 KCTD20Q7Z5Y7 419 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 TICAM1Q8IUC6 712 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 ARHGAP12Q8IWW6 846 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 MAML2Q8IZL2 1156 aaPredicted RBP6.18□□□□□ -1.42
MRE11-209ENST00000540013 SYCP3Q8IZU3 236 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 SIX6OS1Q8N1H7 587 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 CNNM3Q8NE01 707 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 SCAMP4Q969E2 229 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 FAM149B1Q96BN6 582 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 SAT2Q96F10 170 aaPredicted RBP6.18□□□□□ -1.42
MRE11-209ENST00000540013 MASTLQ96GX5 879 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 SLC32A1Q9H598 525 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 ABCB8Q9NUT2 735 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 CWC15Q9P013 229 aaKnown RBP6.18□□□□□ -1.42
MRE11-209ENST00000540013 PCSK1NQ9UHG2 260 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 KCNE5Q9UJ90 142 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 APPL1Q9UKG1 709 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 EXOC7Q9UPT5 735 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 AURKCQ9UQB9 309 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 NIP7Q9Y221 180 aaKnown RBP eCLIP6.18□□□□□ -1.42
MRE11-209ENST00000540013 OSGIN2Q9Y236 505 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 PTRH2Q9Y3E5 179 aaKnown RBP6.18□□□□□ -1.42
MRE11-209ENST00000540013 ADAM18Q9Y3Q7 739 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 SNX14Q9Y5W7 946 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 CDY1Q9Y6F8 540 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 MAP3K15Q6ZN16 1313 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 ANKRD36CQ5JPF3 1778 aa6.18□□□□□ -1.42
MRE11-209ENST00000540013 CEP350Q5VT06 3117 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 TCRBV21S2A2A0A5A6 115 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 ERVV-1B6SEH8 477 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 TEX22C9J3V5 150 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 SYN3O14994 580 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 KIF5CO60282 957 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 TLR2O60603 784 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 AGFG2O95081 481 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 TRIM16O95361 564 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 URODP06132 367 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 TUBBP07437 444 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 ADH4P08319 380 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 FERP16591 822 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 GABRB1P18505 474 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 CCNA2P20248 432 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 DDX6P26196 483 aaKnown RBP eCLIP6.17□□□□□ -1.42
MRE11-209ENST00000540013 CCR10P46092 362 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 SULT1E1P49888 294 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 HNMTP50135 292 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 ZNF81P51508 661 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 ZNF135P52742 658 aaPredicted RBP6.17□□□□□ -1.42
MRE11-209ENST00000540013 GMFBP60983 142 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 TUBB4BP68371 445 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 BLOC1S1P78537 153 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 DGCR2P98153 550 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 LMAN2Q12907 356 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 SGCGQ13326 291 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 TUBB3Q13509 450 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 THOC5Q13769 683 aaKnown RBP6.17□□□□□ -1.42
MRE11-209ENST00000540013 HLFQ16534 295 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 C15orf59Q2T9L4 293 aaPredicted RBP6.17□□□□□ -1.42
MRE11-209ENST00000540013 SLC9B1Q4ZJI4 515 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 LRRC24Q50LG9 513 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 CRB2Q5IJ48 1285 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 ZNF569Q5MCW4 686 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 CACHD1Q5VU97 1274 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 FAM160B1Q5W0V3 765 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 KCNV1Q6PIU1 500 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 KIF6Q6ZMV9 814 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 RGS9BPQ6ZS82 235 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 RUFY3Q7L099 469 aa6.17□□□□□ -1.42
MRE11-209ENST00000540013 LPCAT2Q7L5N7 544 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms