RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 FZD10Q9ULW2 581 aa8.16□□□□□ -1.1
CD4-209ENST00000539492 PCDHB11Q9Y5F2 797 aa8.16□□□□□ -1.1
CD4-209ENST00000539492 RNF215Q9Y6U7 377 aa8.16□□□□□ -1.1
CD4-209ENST00000539492 NBPF19A0A087WUL8 3843 aa8.16□□□□□ -1.1
CD4-209ENST00000539492 RELNP78509 3460 aa8.16□□□□□ -1.1
CD4-209ENST00000539492 TCRBV5S1A1TA0A578 114 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 PRSS38A1L453 326 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 C9orf172C9J069 976 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.15□□□□□ -1.1
CD4-209ENST00000539492 J3KR12 359 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 PDE2AO00408 941 aaPredicted RBP8.15□□□□□ -1.1
CD4-209ENST00000539492 HGSO14964 777 aaPredicted RBP8.15□□□□□ -1.1
CD4-209ENST00000539492 PPFIA2O75334 1257 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 RECQL5O94762 991 aaPredicted RBP8.15□□□□□ -1.1
CD4-209ENST00000539492 CPNE6O95741 557 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 TPM2P07951 284 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 FAM87AP0C7U9 286 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 DESP17661 470 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 ITGB6P18564 788 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 TRIM23P36406 574 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 KLK7P49862 253 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 NDST2P52849 883 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 MAPK10P53779 464 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 RALGDSQ12967 914 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 CLPPQ16740 277 aaPredicted RBP8.15□□□□□ -1.1
CD4-209ENST00000539492 FKBP15Q5T1M5 1219 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 PHF19Q5T6S3 580 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 TMEM164Q5U3C3 297 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 AFMIDQ63HM1 303 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 LIPIQ6XZB0 460 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 DPPA4Q7L190 304 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 MON1BQ7L1V2 547 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 TMPRSS9Q7Z410 1059 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 ZNF438Q7Z4V0 828 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 SRLQ86TD4 932 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 ZFAND4Q86XD8 727 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 CAMK1DQ8IU85 385 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 ECHDC3Q96DC8 303 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 MCEEQ96PE7 176 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 CNPY3Q9BT09 278 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 TMEM168Q9H0V1 697 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 DPEP2Q9H4A9 486 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 CYP4F12Q9HCS2 524 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 NLRC4Q9NPP4 1024 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 MRPL40Q9NQ50 206 aaKnown RBP8.15□□□□□ -1.1
CD4-209ENST00000539492 FAM207AQ9NSI2 230 aaPredicted RBP8.15□□□□□ -1.1
CD4-209ENST00000539492 LRIT1Q9P2V4 623 aa8.15□□□□□ -1.1
CD4-209ENST00000539492 USP9XQ93008 2570 aaPredicted RBP8.15□□□□□ -1.11
CD4-209ENST00000539492 HIVEP3Q5T1R4 2406 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 CACNA1DQ01668 2161 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 MED13Q9UHV7 2174 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 SPTBP11277 2137 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 EIF3CLB5ME19 914 aaKnown RBP8.14□□□□□ -1.11
CD4-209ENST00000539492 STMND1H3BQB6 276 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 AGRPO00253 132 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 EEF2KO00418 725 aaKnown RBP8.14□□□□□ -1.11
CD4-209ENST00000539492 EPHB6O15197 1021 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 ZW10O43264 779 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 SUV39H1O43463 412 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 PALMO75781 387 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 MYCLP1P12525 358 aaPredicted RBP8.14□□□□□ -1.11
CD4-209ENST00000539492 CCNB1P14635 433 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 GM2AP17900 193 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 WT1P19544 449 aaPredicted RBP8.14□□□□□ -1.11
CD4-209ENST00000539492 RGRP47804 291 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 ATP1A2P50993 1020 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 PAPOLAP51003 745 aaKnown RBP8.14□□□□□ -1.11
CD4-209ENST00000539492 MAZP56270 477 aaKnown RBP8.14□□□□□ -1.11
CD4-209ENST00000539492 RPL7AP62424 266 aaKnown RBP8.14□□□□□ -1.11
CD4-209ENST00000539492 POLR2LP62875 67 aaKnown RBP8.14□□□□□ -1.11
CD4-209ENST00000539492 NFKB2Q00653 900 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 B4GALNT1Q00973 533 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 BCL2L1Q07817 233 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 RFTN1Q14699 578 aaPredicted RBP8.14□□□□□ -1.11
CD4-209ENST00000539492 NR1D2Q14995 579 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 C16orf72Q14CZ0 275 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 KRT31Q15323 416 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 SYCP1Q15431 976 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 TBR1Q16650 682 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 DCUN1D2Q6PH85 259 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 PIM3Q86V86 326 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 C17orf82Q86X59 251 aaPredicted RBP8.14□□□□□ -1.11
CD4-209ENST00000539492 SFTPA2Q8IWL1 248 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 PAF1Q8N7H5 531 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 TSEN2Q8NCE0 465 aaKnown RBP8.14□□□□□ -1.11
CD4-209ENST00000539492 CCL4L1Q8NHW4 92 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 GPBAR1Q8TDU6 330 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 ZDHHC1Q8WTX9 485 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 HTR3CQ8WXA8 447 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 CELF6Q96J87 481 aaKnown RBP8.14□□□□□ -1.11
CD4-209ENST00000539492 EIF3CQ99613 913 aaKnown RBP8.14□□□□□ -1.11
CD4-209ENST00000539492 FUCA2Q9BTY2 467 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 CINPQ9BW66 212 aaPredicted RBP8.14□□□□□ -1.11
CD4-209ENST00000539492 GSDMCQ9BYG8 508 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 SLC39A8Q9C0K1 460 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 NUP62CLQ9H1M0 184 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 VPS16Q9H269 839 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 ADNPQ9H2P0 1102 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 SEMA6CQ9H3T2 930 aa8.14□□□□□ -1.11
CD4-209ENST00000539492 CARS2Q9HA77 564 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms