RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 E2F7Q96AV8 911 aa8.9□□□□□ -0.98
DDB1-213ENST00000539332 ASIC4Q96FT7 647 aa8.9□□□□□ -0.98
DDB1-213ENST00000539332 LMLNQ96KR4 655 aa8.9□□□□□ -0.98
DDB1-213ENST00000539332 NUDCD1Q96RS6 583 aa8.9□□□□□ -0.98
DDB1-213ENST00000539332 TRIB3Q96RU7 358 aa8.9□□□□□ -0.98
DDB1-213ENST00000539332 FEM1AQ9BSK4 669 aa8.9□□□□□ -0.98
DDB1-213ENST00000539332 FAM167BQ9BTA0 163 aa8.9□□□□□ -0.98
DDB1-213ENST00000539332 FSD1LQ9BXM9 530 aa8.9□□□□□ -0.98
DDB1-213ENST00000539332 TRIM4Q9C037 500 aa8.9□□□□□ -0.98
DDB1-213ENST00000539332 UGT1A7Q9HAW7 530 aa8.9□□□□□ -0.98
DDB1-213ENST00000539332 UGT1A10Q9HAW8 530 aa8.9□□□□□ -0.98
DDB1-213ENST00000539332 UGT1A8Q9HAW9 530 aa8.9□□□□□ -0.98
DDB1-213ENST00000539332 PCDH12Q9NPG4 1184 aa8.9□□□□□ -0.98
DDB1-213ENST00000539332 SPHK2Q9NRA0 654 aa8.9□□□□□ -0.98
DDB1-213ENST00000539332 TREX1Q9NSU2 369 aa8.9□□□□□ -0.98
DDB1-213ENST00000539332 DUS2Q9NX74 493 aaKnown RBP8.9□□□□□ -0.98
DDB1-213ENST00000539332 PDP2Q9P2J9 529 aa8.9□□□□□ -0.98
DDB1-213ENST00000539332 LNPEPQ9UIQ6 1025 aa8.9□□□□□ -0.98
DDB1-213ENST00000539332 IKBKGQ9Y6K9 419 aa8.9□□□□□ -0.98
DDB1-213ENST00000539332 DPPA5A6NC42 116 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 GRXCR2A6NFK2 248 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 TRIM49D1C9J1S8 452 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 NVLO15381 856 aaKnown RBP8.89□□□□□ -0.99
DDB1-213ENST00000539332 KRT37O76014 449 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 KRT38O76015 456 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 ASMTLO95671 621 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 PENKP01210 267 aaPredicted RBP8.89□□□□□ -0.99
DDB1-213ENST00000539332 HLA-DPA1P20036 260 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 MZF1P28698 734 aaPredicted RBP8.89□□□□□ -0.99
DDB1-213ENST00000539332 NUMBP49757 651 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 NEK3P51956 506 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 PLK1P53350 603 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 WDR4P57081 412 aaKnown RBP8.89□□□□□ -0.99
DDB1-213ENST00000539332 FCHO2Q0JRZ9 810 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 CUL3Q13618 768 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 CYTH1Q15438 398 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 SLC1A5Q15758 541 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 EML3Q32P44 896 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 HABP4Q5JVS0 413 aaKnown RBP8.89□□□□□ -0.99
DDB1-213ENST00000539332 PDPK2PQ6A1A2 396 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 KIAA0930Q6ICG6 404 aaPredicted RBP8.89□□□□□ -0.99
DDB1-213ENST00000539332 PARM1Q6UWI2 310 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 VITQ6UXI7 678 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 PACS1Q6VY07 963 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 ZNF354CQ86Y25 554 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 MFSD6LQ8IWD5 586 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 CTAGE3PQ8IX95 158 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 ANKRD42Q8N9B4 389 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 FIBINQ8TAL6 211 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 MGARPQ8TDB4 240 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 CDKL2Q92772 493 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 FGF14Q92915 247 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 MFSD3Q96ES6 412 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 SERAC1Q96JX3 654 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 ZFYVE19Q96K21 471 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 RMDN2Q96LZ7 410 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 SMC6Q96SB8 1091 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 CPNE1Q99829 537 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 SEMA3CQ99985 751 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 BBS2Q9BXC9 721 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 CHRAC1Q9NRG0 131 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 MARK1Q9P0L2 795 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 VPS51Q9UID3 782 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 RIMKLBQ9ULI2 386 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 CLEC4EQ9ULY5 219 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 MUC22E2RYF6 1773 aaPredicted RBP8.89□□□□□ -0.99
DDB1-213ENST00000539332 TICRRQ7Z2Z1 1910 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 MROH6A6NGR9 719 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 A8MUI8 341 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 NEDD8-MDP1E9PL57 170 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 TM9SF1O15321 606 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 ATP9BO43861 1147 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 RFPL1O75677 317 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 TMCC1O94876 653 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 PAPSS2O95340 614 aaPredicted RBP8.89□□□□□ -0.99
DDB1-213ENST00000539332 MT-ND3P03897 115 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 CYP17A1P05093 508 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 FGF1P05230 155 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 SERPINF2P08697 491 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 TYRP14679 529 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 TPH1P17752 444 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 KRT4P19013 534 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 TAC1P20366 129 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 ADRA1DP25100 572 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 PSMA3P25788 255 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 ARNTP27540 789 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 NMBRP28336 390 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 PTPN4P29074 926 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 GP5P40197 560 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 MAGEA12P43365 314 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 CHRNA4P43681 627 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 RGRP47804 291 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 ARCN1P48444 511 aaKnown RBP8.89□□□□□ -0.99
DDB1-213ENST00000539332 SERPINH1P50454 418 aaKnown RBP8.89□□□□□ -0.99
DDB1-213ENST00000539332 CSRP3P50461 194 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 CSE1LP55060 971 aaKnown RBP8.89□□□□□ -0.99
DDB1-213ENST00000539332 PPARDQ03181 441 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 ACVR1Q04771 509 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 NSUN2Q08J23 767 aaKnown RBP eCLIP8.89□□□□□ -0.99
DDB1-213ENST00000539332 SMAD4Q13485 552 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms