RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 EGFL6Q8IUX8 553 aa6.94□□□□□ -1.3
SORT1-209ENST00000538502 MTMR9Q96QG7 549 aa6.94□□□□□ -1.3
SORT1-209ENST00000538502 PARK7Q99497 189 aaKnown RBP6.94□□□□□ -1.3
SORT1-209ENST00000538502 ABCC13Q9NSE7 274 aa6.94□□□□□ -1.3
SORT1-209ENST00000538502 VPS28Q9UK41 221 aa6.94□□□□□ -1.3
SORT1-209ENST00000538502 A8MUI8 341 aa6.94□□□□□ -1.3
SORT1-209ENST00000538502 PLOD2O00469 737 aa6.94□□□□□ -1.3
SORT1-209ENST00000538502 TIPRLO75663 272 aa6.94□□□□□ -1.3
SORT1-209ENST00000538502 TGFB3P10600 412 aa6.94□□□□□ -1.3
SORT1-209ENST00000538502 PSMB4P28070 264 aa6.94□□□□□ -1.3
SORT1-209ENST00000538502 CCR3P51677 355 aa6.94□□□□□ -1.3
SORT1-209ENST00000538502 ZNHIT3Q15649 155 aaPredicted RBP6.94□□□□□ -1.3
SORT1-209ENST00000538502 MOGQ16653 247 aa6.94□□□□□ -1.3
SORT1-209ENST00000538502 ZNF420Q8TAQ5 688 aaPredicted RBP6.94□□□□□ -1.3
SORT1-209ENST00000538502 KAT2BQ92831 832 aa6.94□□□□□ -1.3
SORT1-209ENST00000538502 RFT1Q96AA3 541 aa6.94□□□□□ -1.3
SORT1-209ENST00000538502 RHOJQ9H4E5 214 aa6.94□□□□□ -1.3
SORT1-209ENST00000538502 FBXO6Q9NRD1 293 aaPredicted RBP6.94□□□□□ -1.3
SORT1-209ENST00000538502 MCUBQ9NWR8 336 aa6.94□□□□□ -1.3
SORT1-209ENST00000538502 SUCOQ9UBS9 1254 aaKnown RBP6.94□□□□□ -1.3
SORT1-209ENST00000538502 KLQ9UEF7 1012 aa6.94□□□□□ -1.3
SORT1-209ENST00000538502 OGDHLQ9ULD0 1010 aa6.94□□□□□ -1.3
SORT1-209ENST00000538502 TRAF6Q9Y4K3 522 aa6.94□□□□□ -1.3
SORT1-209ENST00000538502 CYP3A7-CYP3A51PA0A087WV96 503 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 NOTOA8MTQ0 251 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 DHX15O43143 795 aaKnown RBP6.93□□□□□ -1.3
SORT1-209ENST00000538502 MT-CO1P00395 513 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 CATP04040 527 aaKnown RBP6.93□□□□□ -1.3
SORT1-209ENST00000538502 TPH1P17752 444 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 SLC6A2P23975 617 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 CYP3A7P24462 503 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 HTR7P34969 479 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 OR1G1P47890 313 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 TUBP50607 506 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 HADHBP55084 474 aaKnown RBP6.93□□□□□ -1.3
SORT1-209ENST00000538502 LAMTOR4Q0VGL1 99 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 PLCL1Q15111 1095 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 AGMOQ6ZNB7 445 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 LRRC55Q6ZSA7 311 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 DRAXINQ8NBI3 349 aaPredicted RBP6.93□□□□□ -1.3
SORT1-209ENST00000538502 HEXDCQ8WVB3 486 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 HSFY1Q96LI6 401 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 MND1Q9BWT6 205 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 C1orf21Q9H246 121 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 BLOC1S4Q9NUP1 217 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 ARL15Q9NXU5 204 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 DNM1LO00429 736 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 RFXANKO14593 260 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 AP3D1O14617 1153 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 THP07101 528 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 TFEBP19484 476 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 RPS12P25398 132 aaKnown RBP6.93□□□□□ -1.3
SORT1-209ENST00000538502 POLR2JP52435 117 aaKnown RBP6.93□□□□□ -1.3
SORT1-209ENST00000538502 SNAPC2Q13487 334 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 STARD3Q14849 445 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 GPR162Q16538 588 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 KLHDC10Q6PID8 442 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 USP45Q70EL2 814 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 CUZD1Q86UP6 607 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 COMMD2Q86X83 199 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 RASAL3Q86YV0 1011 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 KBTBD7Q8WVZ9 684 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 WNT8BQ93098 351 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 C18orf25Q96B23 403 aaPredicted RBP6.93□□□□□ -1.3
SORT1-209ENST00000538502 EFHD2Q96C19 240 aaPredicted RBP6.93□□□□□ -1.3
SORT1-209ENST00000538502 HIPK3Q9H422 1215 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 A0A0G2JPF8 293 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 SLC12A8A0AV02 714 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 FAM86C2PA6NEL3 165 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 HNRNPCL3B7ZW38 293 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 ADAMDEC1O15204 470 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 SERPINA3P01011 423 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 UGT2B4P06133 528 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 CCNYL3P0C7X3 344 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 HNRNPCL4P0DMR1 293 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 TLX1P31314 330 aaPredicted RBP6.93□□□□□ -1.3
SORT1-209ENST00000538502 ASMTP46597 345 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 ALDH3A2P51648 485 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 ZDHHC20Q5W0Z9 365 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 GLYATQ6IB77 296 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 BEND5Q7L4P6 421 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 ZNF347Q96SE7 839 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 A0A087X0B3 334 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 KLHL33A6NCF5 533 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 ANKDD1BA6NHY2 528 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 OR10H3O60404 316 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 DNAJB5O75953 348 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 PRKD3O94806 890 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 NTRK1P04629 796 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 C8BP07358 591 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 ARP10275 920 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 MBL2P11226 248 aaPredicted RBP6.93□□□□□ -1.3
SORT1-209ENST00000538502 OAZ1P54368 228 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 ADIGQ0VDE8 80 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 MTAPQ13126 283 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 EFR3AQ14156 821 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 SUZ12Q15022 739 aaKnown RBP6.93□□□□□ -1.3
SORT1-209ENST00000538502 ARMC12Q5T9G4 340 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 OVOS1Q6IE37 1185 aa6.93□□□□□ -1.3
SORT1-209ENST00000538502 OTOP1Q7RTM1 612 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms