RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 EPB41L4BQ9H329 900 aa11.23□□□□□ -0.61
LINC00346-201ENST00000538077 SMIM35A0A1B0GVV1 85 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 PBX3P40426 434 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 SRP54P61011 504 aaKnown RBP11.22□□□□□ -0.61
LINC00346-201ENST00000538077 NAB1Q13506 487 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 CCL14Q16627 93 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 PAGE2Q7Z2X7 111 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 OFCC1Q8IZS5 231 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 ZFP28Q8NHY6 868 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.22□□□□□ -0.61
LINC00346-201ENST00000538077 CCL22O00626 93 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 KPNA5O15131 536 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 SMYD1Q8NB12 490 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 HNRNPLLQ8WVV9 542 aaKnown RBP11.22□□□□□ -0.61
LINC00346-201ENST00000538077 ATL1Q8WXF7 558 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 APBB2Q92870 758 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 UBE2E3Q969T4 207 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 MPP4Q96JB8 637 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 RPL10LQ96L21 214 aaKnown RBP11.22□□□□□ -0.61
LINC00346-201ENST00000538077 SESN1Q9Y6P5 492 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.22□□□□□ -0.61
LINC00346-201ENST00000538077 GLTPD2A6NH11 291 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 FAM155BO75949 473 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 SPATA31C1P0DKV0 1188 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 MATKP42679 507 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 NAGLUP54802 743 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 KPNB1Q14974 876 aaKnown RBP11.22□□□□□ -0.61
LINC00346-201ENST00000538077 FNDC11Q9BVV2 318 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 TLR10Q9BXR5 811 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 DDX18Q9NVP1 670 aaKnown RBP11.22□□□□□ -0.61
LINC00346-201ENST00000538077 GLYATL1P3A0A0U1RQE8 302 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 ULK1O75385 1050 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 LSM3P62310 102 aaKnown RBP11.22□□□□□ -0.61
LINC00346-201ENST00000538077 IRGCQ6NXR0 463 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 LEMD2Q8NC56 503 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 TSEN2Q8NCE0 465 aaKnown RBP11.22□□□□□ -0.61
LINC00346-201ENST00000538077 BSNDQ8WZ55 320 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 C19orf60Q96EN9 201 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 DPEP2Q9H4A9 486 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 CYP3A7-CYP3A51PA0A087WV96 503 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 CYP3A7P24462 503 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 HOXA10P31260 410 aaPredicted RBP11.22□□□□□ -0.61
LINC00346-201ENST00000538077 CXCR3P49682 368 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 CLCN5P51795 746 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 PRKAA2P54646 552 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 ATAT1Q5SQI0 421 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 ALYREFQ86V81 257 aaKnown RBP11.22□□□□□ -0.61
LINC00346-201ENST00000538077 ZDHHC13Q8IUH4 622 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 FBXO15Q8NCQ5 510 aaPredicted RBP11.22□□□□□ -0.61
LINC00346-201ENST00000538077 CYP2S1Q96SQ9 504 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 DEC1Q9P2X7 70 aa11.22□□□□□ -0.61
LINC00346-201ENST00000538077 NALCNQ8IZF0 1738 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 PER2O15055 1255 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 OR10H3O60404 316 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 VIPP01282 170 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 MANFP55145 182 aaKnown RBP11.21□□□□□ -0.61
LINC00346-201ENST00000538077 CDK18Q07002 472 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 ZNF155Q12901 538 aaPredicted RBP11.21□□□□□ -0.61
LINC00346-201ENST00000538077 AMZ1Q400G9 498 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 CFAP206Q8IYR0 622 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 SVOPQ8N4V2 548 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 TEKT5Q96M29 485 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 PANX1Q96RD7 426 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 SIKE1Q9BRV8 207 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 TMEM216Q9P0N5 145 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 PDP2Q9P2J9 529 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 COL3A1P02461 1466 aaPredicted RBP11.21□□□□□ -0.61
LINC00346-201ENST00000538077 RHPN2P1A8MT19 583 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 KHDRBS3O75525 346 aaKnown RBP11.21□□□□□ -0.61
LINC00346-201ENST00000538077 RXRGP48443 463 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 PPIGQ13427 754 aaKnown RBP eCLIP11.21□□□□□ -0.61
LINC00346-201ENST00000538077 PIGKQ92643 395 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 SLC47A1Q96FL8 570 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 FAM163AQ96GL9 167 aaPredicted RBP11.21□□□□□ -0.61
LINC00346-201ENST00000538077 NMUR1Q9HB89 426 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 C2CD2Q9Y426 696 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 OR6C75A6NL08 312 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 ALADP13716 330 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 ME2P23368 584 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 MAPKAPK2P49137 400 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 MRPS35P82673 323 aaKnown RBP11.21□□□□□ -0.61
LINC00346-201ENST00000538077 DUSP28Q4G0W2 176 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 ARMCX6Q7L4S7 300 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 TMPRSS6Q8IU80 811 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 CLVS1Q8IUQ0 354 aaPredicted RBP11.21□□□□□ -0.61
LINC00346-201ENST00000538077 SLC39A8Q9C0K1 460 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 PDZD7Q9H5P4 517 aa11.21□□□□□ -0.61
LINC00346-201ENST00000538077 SLC31A1O15431 190 aa11.21□□□□□ -0.62
LINC00346-201ENST00000538077 TSPAN1O60635 241 aa11.21□□□□□ -0.62
LINC00346-201ENST00000538077 PPP1R11O60927 126 aaPredicted RBP11.21□□□□□ -0.62
LINC00346-201ENST00000538077 FGF19O95750 216 aa11.21□□□□□ -0.62
LINC00346-201ENST00000538077 MLYCDO95822 493 aa11.21□□□□□ -0.62
LINC00346-201ENST00000538077 NT5EP21589 574 aa11.21□□□□□ -0.62
LINC00346-201ENST00000538077 TIE1P35590 1138 aa11.21□□□□□ -0.62
LINC00346-201ENST00000538077 CTSOP43234 321 aaPredicted RBP11.21□□□□□ -0.62
LINC00346-201ENST00000538077 TRAF3Q13114 568 aa11.21□□□□□ -0.62
LINC00346-201ENST00000538077 SQLEQ14534 574 aa11.21□□□□□ -0.62
LINC00346-201ENST00000538077 KYAT3Q6YP21 454 aaKnown RBP11.21□□□□□ -0.62
LINC00346-201ENST00000538077 CENPIQ92674 756 aaPredicted RBP11.21□□□□□ -0.62
LINC00346-201ENST00000538077 HSFY1Q96LI6 401 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms