RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 ZNF783Q6ZMS7 281 aa15.7■□□□□ 0.1
MKS1-204ENST00000537529 SLC39A11Q8N1S5 342 aa15.7■□□□□ 0.1
MKS1-204ENST00000537529 KDM1BQ8NB78 822 aa15.7■□□□□ 0.1
MKS1-204ENST00000537529 RMDN1Q96DB5 314 aa15.7■□□□□ 0.1
MKS1-204ENST00000537529 RTKNQ9BST9 563 aa15.7■□□□□ 0.1
MKS1-204ENST00000537529 POPDC3Q9HBV1 291 aa15.7■□□□□ 0.1
MKS1-204ENST00000537529 GTSE1Q9NYZ3 720 aa15.7■□□□□ 0.1
MKS1-204ENST00000537529 STX18Q9P2W9 335 aaKnown RBP15.7■□□□□ 0.1
MKS1-204ENST00000537529 CRYL1Q9Y2S2 319 aa15.7■□□□□ 0.1
MKS1-204ENST00000537529 MICAL3Q7RTP6 2002 aa15.7■□□□□ 0.1
MKS1-204ENST00000537529 C2orf78A6NCI8 922 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 NEMP2A6NFY4 417 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 CBX4O00257 560 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 LATS1O95835 1130 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 SLC4A1P02730 911 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 RPSAP08865 295 aaKnown RBP15.69■□□□□ 0.1
MKS1-204ENST00000537529 THRAP10827 490 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 CR2P20023 1033 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 PIK3R1P27986 724 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 PMLP29590 882 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 ADSLP30566 484 aaPredicted RBP15.69■□□□□ 0.1
MKS1-204ENST00000537529 PPARGP37231 505 aaPredicted RBP15.69■□□□□ 0.1
MKS1-204ENST00000537529 ZNF140P52738 457 aaPredicted RBP15.69■□□□□ 0.1
MKS1-204ENST00000537529 ACTR3P61158 418 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 SLC34A1Q06495 639 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 PTPRCAPQ14761 206 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 CYTH1Q15438 398 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 TAF11Q15544 211 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 TAF1AQ15573 450 aaPredicted RBP15.69■□□□□ 0.1
MKS1-204ENST00000537529 PDCD2Q16342 344 aaPredicted RBP15.69■□□□□ 0.1
MKS1-204ENST00000537529 AFTPHQ6ULP2 937 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 KIRREL3Q8IZU9 778 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 CPSF7Q8N684 471 aaKnown RBP15.69■□□□□ 0.1
MKS1-204ENST00000537529 ACTRT2Q8TDY3 377 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 ANKRD49Q8WVL7 239 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 PPP1R36Q96LQ0 422 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 PANX3Q96QZ0 392 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 RNF38Q9H0F5 515 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 CYP4F12Q9HCS2 524 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 TRPC7Q9HCX4 862 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 INTS10Q9NVR2 710 aaKnown RBP15.69■□□□□ 0.1
MKS1-204ENST00000537529 SSX2IPQ9Y2D8 614 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 CCNT2O60583 730 aaKnown RBP15.69■□□□□ 0.1
MKS1-204ENST00000537529 URODP06132 367 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 ITGAXP20702 1163 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 ELF1P32519 619 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 STC1P52823 247 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 TWF1Q12792 350 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 RAB33AQ14088 237 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 TYSND1Q2T9J0 566 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 GPR158Q5T848 1215 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 NXNQ6DKJ4 435 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 FRMD7Q6ZUT3 714 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 C16orf59Q7L2K0 433 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 GLT6D1Q7Z4J2 308 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 PIM3Q86V86 326 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 PNPLA1Q8N8W4 532 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 EXOC2Q96KP1 924 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 TDRD1Q9BXT4 1180 aaKnown RBP15.69■□□□□ 0.1
MKS1-204ENST00000537529 OSBPL1AQ9BXW6 950 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 ANGPTL2Q9UKU9 493 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 SPO11Q9Y5K1 396 aa15.69■□□□□ 0.1
MKS1-204ENST00000537529 COL4A6Q14031 1691 aa15.68■□□□□ 0.1
MKS1-204ENST00000537529 LOC100653049A0A140TA62 436 aa15.68■□□□□ 0.1
MKS1-204ENST00000537529 KRT34O76011 436 aa15.68■□□□□ 0.1
MKS1-204ENST00000537529 PENKP01210 267 aaPredicted RBP15.68■□□□□ 0.1
MKS1-204ENST00000537529 MBL2P11226 248 aaPredicted RBP15.68■□□□□ 0.1
MKS1-204ENST00000537529 VHLP40337 213 aa15.68■□□□□ 0.1
MKS1-204ENST00000537529 SUOXP51687 545 aa15.68■□□□□ 0.1
MKS1-204ENST00000537529 EPHB3P54753 998 aa15.68■□□□□ 0.1
MKS1-204ENST00000537529 SESN3P58005 492 aa15.68■□□□□ 0.1
MKS1-204ENST00000537529 SATB1Q01826 763 aa15.68■□□□□ 0.1
MKS1-204ENST00000537529 SEMA3AQ14563 771 aa15.68■□□□□ 0.1
MKS1-204ENST00000537529 CXorf57Q6NSI4 855 aaKnown RBP15.68■□□□□ 0.1
MKS1-204ENST00000537529 ZNF549Q6P9A3 640 aa15.68■□□□□ 0.1
MKS1-204ENST00000537529 TMEM207Q6UWW9 146 aa15.68■□□□□ 0.1
MKS1-204ENST00000537529 CDKN2AIPNLQ96HQ2 116 aa15.68■□□□□ 0.1
MKS1-204ENST00000537529 ZNF570Q96NI8 536 aa15.68■□□□□ 0.1
MKS1-204ENST00000537529 AARSD1Q9BTE6 412 aaKnown RBP15.68■□□□□ 0.1
MKS1-204ENST00000537529 ZNF385DQ9H6B1 395 aa15.68■□□□□ 0.1
MKS1-204ENST00000537529 ALG9Q9H6U8 611 aa15.68■□□□□ 0.1
MKS1-204ENST00000537529 STOML2Q9UJZ1 356 aa15.68■□□□□ 0.1
MKS1-204ENST00000537529 CHD5Q8TDI0 1954 aa15.68■□□□□ 0.1
MKS1-204ENST00000537529 C2orf81A6NN90 581 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 SMIM24O75264 130 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 LAG3P18627 525 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 KCNA5P22460 613 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 RFC2P35250 354 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 BTKQ06187 659 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 SULT2A1Q06520 285 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 GALNT1Q10472 559 aaPredicted RBP15.67■□□□□ 0.1
MKS1-204ENST00000537529 HERC3Q15034 1050 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 RALGPS1Q5JS13 557 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 MYLK4Q86YV6 388 aaPredicted RBP15.67■□□□□ 0.1
MKS1-204ENST00000537529 LPCAT1Q8NF37 534 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 WBP2Q969T9 261 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 LENG8Q96PV6 779 aaPredicted RBP15.67■□□□□ 0.1
MKS1-204ENST00000537529 TRMOQ9BU70 441 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 ADGRE3Q9BY15 652 aa15.67■□□□□ 0.1
MKS1-204ENST00000537529 SMPD4Q9NXE4 827 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms