RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 LAMC2Q13753 1193 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 LTBP2Q14767 1821 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 HIF1AQ16665 826 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 TBRG1Q3YBR2 411 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 SUPT20HL1Q3ZLR7 823 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 FASTKD1Q53R41 847 aaKnown RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 PIGGQ5H8A4 983 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 PPM1JQ5JR12 505 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 DACT2Q5SW24 774 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 TREML2Q5T2D2 321 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 CYB5R2Q6BCY4 276 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 NXNQ6DKJ4 435 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 XAF1Q6GPH4 301 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 TMEM65Q6PI78 240 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 CES3Q6UWW8 571 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 SLC16A12Q6ZSM3 486 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 CENPUQ71F23 418 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 CDH24Q86UP0 819 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 TDRPQ86YL5 185 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 MCOLN2Q8IZK6 566 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ZNF557Q8N988 423 aaPredicted RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 LSM14AQ8ND56 463 aaKnown RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 OR8K3Q8NH51 312 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 MAGEE2Q8TD90 523 aaPredicted RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 NSUN6Q8TEA1 469 aaKnown RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 CANT1Q8WVQ1 401 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 TRMT61AQ96FX7 289 aaKnown RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 ATXN7L3BQ96GX2 97 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 SLC39A13Q96H72 371 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ST6GAL2Q96JF0 529 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 PPP1R2P1Q96PQ5 205 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 KCNK16Q96T55 309 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ADI1Q9BV57 179 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 SERHL2Q9H4I8 314 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 PIF1Q9H611 641 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 MOV10Q9HCE1 1003 aaKnown RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 HOMER2Q9NSB8 354 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 MRPL39Q9NYK5 338 aaKnown RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 EGFL7Q9UHF1 273 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 NUFIP1Q9UHK0 495 aaKnown RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 ATP6V1HQ9UI12 483 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 DIMT1Q9UNQ2 313 aaKnown RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 B3GNT3Q9Y2A9 372 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 HES2Q9Y543 173 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 PCDHGA9Q9Y5G4 932 aaKnown RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 PCDHA2Q9Y5H9 948 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ANKRD12Q6UB98 2062 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ALPK3Q96L96 1907 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 UTRNP46939 3433 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 PNMA6FA0A0J9YX94 578 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 M0R2N6 131 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 GCATO75600 419 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 DNAJB5O75953 348 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 MT-CO1P00395 513 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 NR3C1P04150 777 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 CALB1P05937 261 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 CHRM5P08912 532 aaPredicted RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 ALOX5P09917 674 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ADORA2AP29274 412 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 MAPK4P31152 587 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 SHMT2P34897 504 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 TRAPPC10P48553 1259 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 NAPAP54920 295 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 GJA9P57773 515 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ACTR2P61160 394 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 RPL26P61254 145 aaKnown RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 ATP6V0D1P61421 351 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 RPS8P62241 208 aaKnown RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 GUCA2AQ02747 115 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 C19orf57Q0VDD7 668 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 BNIP2Q12982 314 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 TRIM32Q13049 653 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 STXBP2Q15833 593 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 CALCRLQ16602 461 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ADPRMQ3LIE5 342 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 OTUD3Q5T2D3 398 aaPredicted RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 TEDDM1Q5T9Z0 273 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 FAM91A1Q658Y4 838 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 TBPL2Q6SJ96 375 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 PAMR1Q6UXH9 720 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 GK5Q6ZS86 529 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 BBS12Q6ZW61 710 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 FRA10AC1Q70Z53 315 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ABI3BPQ7Z7G0 1075 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 C10orf107Q8IVU9 208 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 TRIM48Q8IWZ4 208 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ADGRF2Q8IZF7 708 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 UBR7Q8N806 425 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ZNF781Q8N8C0 355 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 CCDC89Q8N998 374 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 IL17RDQ8NFM7 739 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 OR13F1Q8NGS4 319 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 HM13Q8TCT9 377 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ZNF296Q8WUU4 475 aaPredicted RBP3.74□□□□□ -1.81
MCF2-210ENST00000536274 AKAP1Q92667 903 aaKnown RBP eCLIP3.74□□□□□ -1.81
MCF2-210ENST00000536274 COA7Q96BR5 231 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 VPS39Q96JC1 886 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 HDHD5Q9BXW7 423 aa3.74□□□□□ -1.81
MCF2-210ENST00000536274 ANKRD60Q9BZ19 345 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms