RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 AGPAT1Q99943 283 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 DPYSL5Q9BPU6 564 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 WRAP53Q9BUR4 548 aaKnown RBP11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 NUP62CLQ9H1M0 184 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 CLMPQ9H6B4 373 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 FGF22Q9HCT0 170 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 FAM207AQ9NSI2 230 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 CHMP5Q9NZZ3 219 aa11.26□□□□□ -0.61
CLSTN3-206ENST00000535668 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 J3KR12 359 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 CACNB4O00305 520 aaPredicted RBP11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 PIGNO95427 931 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 CPNE6O95741 557 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 PEX11BO96011 259 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 MYCLP1P12525 358 aaPredicted RBP11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 XPAP23025 273 aaPredicted RBP11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 RGRP47804 291 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 RENBPP51606 427 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 OGDHQ02218 1023 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 ERMARDQ5T6L9 678 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 KCTD16Q68DU8 428 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 PNCKQ6P2M8 343 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 DNAJC24Q6P3W2 148 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 LRRC49Q8IUZ0 686 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 PLA2G15Q8NCC3 412 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 TSEN2Q8NCE0 465 aaKnown RBP11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 KIAA1524Q8TCG1 905 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 SLC39A8Q9C0K1 460 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 CDH19Q9H159 772 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 HSD3B7Q9H2F3 369 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 TAB2Q9NYJ8 693 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 SEPT10Q9P0V9 454 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 TUBD1Q9UJT1 453 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 DOLKQ9UPQ8 538 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 SLC17A4Q9Y2C5 497 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 OR1A2Q9Y585 309 aa11.25□□□□□ -0.61
CLSTN3-206ENST00000535668 SPTBN1Q01082 2364 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 COL12A1Q99715 3063 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 TMEM191CA6NGB0 347 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 ZW10O43264 779 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 SUV39H1O43463 412 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 B4GAT1O43505 415 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 CEACAM5P06731 702 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 TPM2P07951 284 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 CCNB1P14635 433 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 DESP17661 470 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 NFKBIAP25963 317 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 PCK1P35558 622 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 KLK7P49862 253 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 PAPOLAP51003 745 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 COPB1P53618 953 aaKnown RBP11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 TPI1P60174 286 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 KCNC4Q03721 635 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 BCL2L1Q07817 233 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 DPYSQ14117 519 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 SYCP1Q15431 976 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 CRTC2Q53ET0 693 aaPredicted RBP11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 LRRC73Q5JTD7 316 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 ALG1LQ6GMV1 187 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 CRTC1Q6UUV9 634 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 LEKR1Q6ZMV7 388 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 RFX8Q6ZV50 586 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 NRROSQ86YC3 692 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 FATE1Q969F0 183 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 SCRN2Q96FV2 425 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 NSMCE3Q96MG7 304 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 MCEEQ96PE7 176 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 FRMD8Q9BZ67 464 aaPredicted RBP11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 SPRY4Q9C004 299 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 VPS16Q9H269 839 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 ADNPQ9H2P0 1102 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 WDR26Q9H7D7 661 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 NLRC4Q9NPP4 1024 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 PARVAQ9NVD7 372 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 LRIT1Q9P2V4 623 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 GULP1Q9UBP9 304 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 SEPT3Q9UH03 358 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 LOXL2Q9Y4K0 774 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 RNF215Q9Y6U7 377 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 NOTCH2Q04721 2471 aa11.24□□□□□ -0.61
CLSTN3-206ENST00000535668 PRSS38A1L453 326 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 C9orf172C9J069 976 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 CREB3O43889 395 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 PALMO75781 387 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 FUCA1P04066 466 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 FGF1P05230 155 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 IVLP07476 585 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 ELFN1P0C7U0 828 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 JMJD7P0C870 316 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 FERP16591 822 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 ERCC2P18074 760 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 FASLGP48023 281 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 DPYSL2Q16555 572 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 HSP90AA4PQ58FG1 418 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 KIAA1614Q5VZ46 1190 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 SPECC1LQ69YQ0 1117 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 TMPRSS9Q7Z410 1059 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 FAM46DQ8NEK8 389 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 NEK11Q8NG66 645 aa11.23□□□□□ -0.61
CLSTN3-206ENST00000535668 OR4D9Q8NGE8 314 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms