RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 ACTL7AQ9Y615 435 aa13.43□□□□□ -0.26
BEST1-208ENST00000534553 CCDC189A1A4V9 331 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 CCDC162PA2VCL2 907 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 LINC01553A4QN01 128 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 HIDE1A8MVS5 230 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 TARM1B6A8C7 271 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 ZNF197O14709 1029 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 RASSF9O75901 435 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 HSPA4LO95757 839 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 IGSF6O95976 241 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 PENKP01210 267 aaPredicted RBP13.42□□□□□ -0.26
BEST1-208ENST00000534553 ATP5F1P24539 256 aaPredicted RBP13.42□□□□□ -0.26
BEST1-208ENST00000534553 SERPINB3P29508 390 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 SUOXP51687 545 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 EPHB1P54762 984 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 DNAJB13P59910 316 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 PLEKHG6Q3KR16 790 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 ARMC12Q5T9G4 340 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 CES4AQ5XG92 561 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 LINGO4Q6UY18 593 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 PIWIL4Q7Z3Z4 852 aaKnown RBP13.42□□□□□ -0.26
BEST1-208ENST00000534553 MFSD6LQ8IWD5 586 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 TMEM151AQ8N4L1 468 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 SHKBP1Q8TBC3 707 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 MICAL1Q8TDZ2 1067 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 SH3RF2Q8TEC5 729 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 ISG20Q96AZ6 181 aaKnown RBP13.42□□□□□ -0.26
BEST1-208ENST00000534553 UBXN10Q96LJ8 280 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 GPR78Q96P69 363 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 C20orf27Q9GZN8 174 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 DRC3Q9H069 523 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 MAGEE1Q9HCI5 957 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 SLC40A1Q9NP59 571 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 MAN1C1Q9NR34 630 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 NCKIPSDQ9NZQ3 722 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 XPR1Q9UBH6 696 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 PCDHGC4Q9Y5F7 938 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 COMMD10Q9Y6G5 202 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 DENND4CQ5VZ89 1909 aa13.42□□□□□ -0.26
BEST1-208ENST00000534553 TK2O00142 265 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 STX7O15400 261 aaKnown RBP13.41□□□□□ -0.26
BEST1-208ENST00000534553 SERPINA6P08185 405 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 NQO1P15559 274 aaKnown RBP13.41□□□□□ -0.26
BEST1-208ENST00000534553 CD9P21926 228 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 CALB2P22676 271 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 TTPAP49638 278 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 SULT2A1Q06520 285 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 TRAF2Q12933 501 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 DMC1Q14565 340 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 CTC1Q2NKJ3 1217 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 TTC31Q49AM3 519 aaPredicted RBP13.41□□□□□ -0.26
BEST1-208ENST00000534553 SLC22A9Q8IVM8 553 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 OR4K2Q8NGD2 314 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 OR13C4Q8NGS5 318 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 SLC22A17Q8WUG5 538 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 NXNL1Q96CM4 212 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 MYO19Q96H55 970 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 SORT1Q99523 831 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 ILKAPQ9H0C8 392 aaPredicted RBP13.41□□□□□ -0.26
BEST1-208ENST00000534553 CCDC68Q9H2F9 335 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 SYTL2Q9HCH5 934 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 TDP1Q9NUW8 608 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 CPSF2Q9P2I0 782 aaKnown RBP13.41□□□□□ -0.26
BEST1-208ENST00000534553 HAO1Q9UJM8 370 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.41□□□□□ -0.26
BEST1-208ENST00000534553 RAP2CQ9Y3L5 183 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 SPO11Q9Y5K1 396 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 A0A1W2PQ67 120 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 LCHNA4D1U4 455 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 F8W8V4 182 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 ITM2AO43736 263 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 NPHS1O60500 1241 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 PGLSO95336 258 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 FDXRP22570 491 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 PPARGP37231 505 aaPredicted RBP13.41□□□□□ -0.26
BEST1-208ENST00000534553 ADARP55265 1226 aaKnown RBP13.41□□□□□ -0.26
BEST1-208ENST00000534553 BCL2L1Q07817 233 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 LMAN2Q12907 356 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 PRKAA1Q13131 559 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 RCN2Q14257 317 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 CFAP157Q5JU67 520 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 RBM20Q5T481 1227 aaKnown RBP13.41□□□□□ -0.26
BEST1-208ENST00000534553 STK40Q8N2I9 435 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 MDGA1Q8NFP4 955 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 WFDC5Q8TCV5 224 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.41□□□□□ -0.26
BEST1-208ENST00000534553 RILPQ96NA2 401 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 TUBGCP5Q96RT8 1024 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 OLFM1Q99784 485 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 CEP44Q9C0F1 390 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 ATP13A3Q9H7F0 1226 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 MARCH4Q9P2E8 410 aaPredicted RBP13.41□□□□□ -0.26
BEST1-208ENST00000534553 VTI1BQ9UEU0 232 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 HS3ST2Q9Y278 367 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 FCF1Q9Y324 198 aaKnown RBP13.41□□□□□ -0.26
BEST1-208ENST00000534553 PKP3Q9Y446 797 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 KCTD3Q9Y597 815 aa13.41□□□□□ -0.26
BEST1-208ENST00000534553 GOLGA8CPA6NN73 597 aa13.4□□□□□ -0.26
BEST1-208ENST00000534553 FCHO1O14526 889 aa13.4□□□□□ -0.26
BEST1-208ENST00000534553 SLC9A3R1O14745 358 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms