RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 DPP6P42658 865 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 FNTBP49356 437 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 SERPINB9P50453 376 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 SCNN1BP51168 640 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 MAGOHP61326 146 aaKnown RBP10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 PPP2R2AP63151 447 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 CRADDP78560 199 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 MGAT5Q09328 741 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 SIM2Q14190 667 aaPredicted RBP10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 EFTUD2Q15029 972 aaKnown RBP eCLIP10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 PCSK7Q16549 785 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 TUBB8Q3ZCM7 444 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 USP39Q53GS9 565 aaKnown RBP10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 SIRPB2Q5JXA9 342 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 KCTD16Q68DU8 428 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 KIAA0930Q6ICG6 404 aaPredicted RBP10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 TRMT10BQ6PF06 316 aaKnown RBP10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 LINGO4Q6UY18 593 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 LEKR1Q6ZMV7 388 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 SRLQ86TD4 932 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 ADIPOR2Q86V24 386 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 TRABD2AQ86V40 505 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 SH2D3CQ8N5H7 860 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 PCDH20Q8N6Y1 951 aaKnown RBP10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 ZNF513Q8N8E2 541 aaPredicted RBP10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 MZB1Q8WU39 189 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 BHMTQ93088 406 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 IFT43Q96FT9 208 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 GABRG3Q99928 467 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 CNOT10Q9H9A5 744 aaKnown RBP10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 SSU72Q9NP77 194 aaKnown RBP10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 SMYD2Q9NRG4 433 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 TREX1Q9NSU2 369 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 NSMCE4AQ9NXX6 385 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 BCCIPQ9P287 314 aaKnown RBP eCLIP10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 NCDNQ9UBB6 729 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 CTNNAL1Q9UBT7 734 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 SLC25A13Q9UJS0 675 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 FCF1Q9Y324 198 aaKnown RBP10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 PCDHGA5Q9Y5G8 931 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 CKAP5Q14008 2032 aa10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 RIF1Q5UIP0 2472 aaKnown RBP10.12□□□□□ -0.79
LDLRAD3-206ENST00000534091 OTOGLQ3ZCN5 2332 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 MROH6A6NGR9 719 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 HRO43593 1189 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 FZD6O60353 706 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 SOCS5O75159 536 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 SIN3BO75182 1162 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 ZNF821O75541 412 aaPredicted RBP10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 RPP40O75818 363 aaKnown RBP10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 RHOBTB1O94844 696 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 MT-CO1P00395 513 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 PRLP01236 227 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 C7P10643 843 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 SRCP12931 536 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 TPH1P17752 444 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 PAMP19021 973 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 CHRNA4P43681 627 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 SLC18A1P54219 525 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 RPL26P61254 145 aaKnown RBP10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 SNRPD1P62314 119 aaKnown RBP10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 KDSRQ06136 332 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 DNAJC3Q13217 504 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 ENPP2Q13822 863 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 TMED2Q15363 201 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 C2orf27AQ580R0 203 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 LGSNQ5TDP6 509 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 MBLAC2Q68D91 279 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 NAIF1Q69YI7 327 aaPredicted RBP10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 PDPK2PQ6A1A2 396 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 C22orf39Q6P5X5 142 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 EXOC3L1Q86VI1 746 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 CNTN4Q8IWV2 1026 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 PPM1NQ8N819 430 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 NAT16Q8N8M0 369 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 MTBPQ96DY7 904 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 MFSD3Q96ES6 412 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 NSMCE3Q96MG7 304 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 FCRL3Q96P31 734 aaPredicted RBP10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 TUBGCP5Q96RT8 1024 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 CPNE1Q99829 537 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 C19orf43Q9BQ61 176 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 TRIM56Q9BRZ2 755 aaKnown RBP10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 FBRSQ9HAH7 460 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 CHRAC1Q9NRG0 131 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 RPL26L1Q9UNX3 145 aaKnown RBP10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 RAI2Q9Y5P3 530 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 IKBKGQ9Y6K9 419 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 EML5Q05BV3 1969 aa10.11□□□□□ -0.79
LDLRAD3-206ENST00000534091 PIKFYVEQ9Y2I7 2098 aa10.1□□□□□ -0.79
LDLRAD3-206ENST00000534091 A0A1W2PQ67 120 aa10.1□□□□□ -0.79
LDLRAD3-206ENST00000534091 TTC24A2A3L6 582 aaPredicted RBP10.1□□□□□ -0.79
LDLRAD3-206ENST00000534091 CXorf49A8MYA2 514 aaPredicted RBP10.1□□□□□ -0.79
LDLRAD3-206ENST00000534091 PRR5-ARHGAP8B1AHC4 643 aa10.1□□□□□ -0.79
LDLRAD3-206ENST00000534091 WASH3PC4AMC7 463 aa10.1□□□□□ -0.79
LDLRAD3-206ENST00000534091 POLR3GO15318 223 aaPredicted RBP10.1□□□□□ -0.79
LDLRAD3-206ENST00000534091 HTRA2O43464 458 aaPredicted RBP10.1□□□□□ -0.79
LDLRAD3-206ENST00000534091 SMAD6O43541 496 aaKnown RBP10.1□□□□□ -0.79
LDLRAD3-206ENST00000534091 ZNF217O75362 1048 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms