RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 TRABD2BA6NFA1 517 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 I6L893 689 aaPredicted RBP6.11□□□□□ -1.43
SOX6-216ENST00000533658 K7ERQ8 282 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 SDC3O75056 442 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 ENDOD1O94919 500 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 IGLV3-19P01714 112 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 AFPP02771 609 aaKnown RBP6.11□□□□□ -1.43
SOX6-216ENST00000533658 PAEPP09466 180 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 ZNF883P0CG24 379 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 TBXAS1P24557 533 aaPredicted RBP6.11□□□□□ -1.43
SOX6-216ENST00000533658 SLC8A1P32418 973 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 ABCG1P45844 678 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 SLC11A2P49281 568 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 GALCP54803 685 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 YWHAEP62258 255 aaKnown RBP6.11□□□□□ -1.43
SOX6-216ENST00000533658 PRR5P85299 388 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 ENPEPQ07075 957 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 NME3Q13232 169 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 CDH18Q13634 790 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 EIF4HQ15056 248 aaKnown RBP6.11□□□□□ -1.43
SOX6-216ENST00000533658 SHBQ15464 509 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 CST6Q15828 149 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 RAB6CQ53S08 254 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 COBLL1Q53SF7 1204 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 ZNF776Q68DI1 518 aaPredicted RBP6.11□□□□□ -1.43
SOX6-216ENST00000533658 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.11□□□□□ -1.43
SOX6-216ENST00000533658 DEFB106AQ8N104 65 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.11□□□□□ -1.43
SOX6-216ENST00000533658 FAM169BQ8N8A8 192 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 NETO2Q8NC67 525 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 HJURPQ8NCD3 748 aaPredicted RBP6.11□□□□□ -1.43
SOX6-216ENST00000533658 C1orf131Q8NDD1 294 aaKnown RBP6.11□□□□□ -1.43
SOX6-216ENST00000533658 CADM4Q8NFZ8 388 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 PIP4K2CQ8TBX8 421 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 IGSF8Q969P0 613 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 SLC39A13Q96H72 371 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 PEX11GQ96HA9 241 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 DHTKD1Q96HY7 919 aaPredicted RBP6.11□□□□□ -1.43
SOX6-216ENST00000533658 SRPK1Q96SB4 655 aaKnown RBP6.11□□□□□ -1.43
SOX6-216ENST00000533658 CPXM1Q96SM3 734 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 SLC2A11Q9BYW1 496 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 BTBD1Q9H0C5 482 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 RAB6CQ9H0N0 254 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 PABPC3Q9H361 631 aaKnown RBP6.11□□□□□ -1.43
SOX6-216ENST00000533658 FZD3Q9NPG1 666 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 AASDHPPTQ9NRN7 309 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 ERVW-1Q9UQF0 538 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 ATP6V1DQ9Y5K8 247 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 ACTL7AQ9Y615 435 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 KNL1Q8NG31 2342 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 GOLGA4Q13439 2230 aaKnown RBP6.11□□□□□ -1.43
SOX6-216ENST00000533658 COL12A1Q99715 3063 aa6.11□□□□□ -1.43
SOX6-216ENST00000533658 HMGB1P1B2RPK0 211 aaPredicted RBP6.1□□□□□ -1.43
SOX6-216ENST00000533658 CAPN9O14815 690 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 CASC3O15234 703 aaKnown RBP6.1□□□□□ -1.43
SOX6-216ENST00000533658 FLRT2O43155 660 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 IRAK2O43187 625 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 TIMM44O43615 452 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 SNAP91O60641 907 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 CNTN5O94779 1100 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 LUC7L3O95232 432 aaKnown RBP6.1□□□□□ -1.43
SOX6-216ENST00000533658 CER1O95813 267 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 TRUB2O95900 331 aaKnown RBP6.1□□□□□ -1.43
SOX6-216ENST00000533658 MT-CO1P00395 513 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 IL1BP01584 269 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 ERBB2P04626 1255 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 ATP5BP06576 529 aaKnown RBP6.1□□□□□ -1.43
SOX6-216ENST00000533658 PRLRP16471 622 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 ITPKBP27987 946 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 OXTRP30559 389 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 RNASE9P60153 205 aaKnown RBP6.1□□□□□ -1.43
SOX6-216ENST00000533658 ST8SIA6P61647 398 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 PAK1Q13153 545 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 PDCLQ13371 301 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 STIM1Q13586 685 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 SLC9A5Q14940 896 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 HNRNPA1L2Q32P51 320 aaKnown RBP6.1□□□□□ -1.43
SOX6-216ENST00000533658 ACCSLQ4AC99 568 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 OTUD1Q5VV17 481 aaPredicted RBP6.1□□□□□ -1.43
SOX6-216ENST00000533658 TAF3Q5VWG9 929 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 NUGGCQ68CJ6 796 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 KIAA0895LQ68EN5 471 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 CXorf57Q6NSI4 855 aaKnown RBP6.1□□□□□ -1.43
SOX6-216ENST00000533658 LINGO4Q6UY18 593 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 FAM183BPQ6ZVS7 135 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 SLC47A2Q86VL8 602 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 UNC45BQ8IWX7 931 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 CCAR2Q8N163 923 aaKnown RBP6.1□□□□□ -1.43
SOX6-216ENST00000533658 ZNF843Q8N446 348 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 TTC39CQ8N584 583 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 OR14C36Q8NHC7 312 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 FIBINQ8TAL6 211 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 WFIKKN2Q8TEU8 576 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 ZNF606Q8WXB4 792 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 IRGQQ8WZA9 623 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 GOLGA1Q92805 767 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 PMM1Q92871 262 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 PTPRN2Q92932 1015 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 TTC17Q96AE7 1141 aa6.1□□□□□ -1.43
SOX6-216ENST00000533658 HSFY1Q96LI6 401 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms