RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 KRT12Q99456 494 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 TBL1YQ9BQ87 522 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 C1QTNF7Q9BXJ2 289 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 C1QTNF2Q9BXJ5 285 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 MIR1-1HGQ9H1L0 117 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 TRABDQ9H4I3 376 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 EIF2B4Q9UI10 523 aaKnown RBP11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 SMG5Q9UPR3 1016 aaKnown RBP11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 ZFR2Q9UPR6 939 aaKnown RBP11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 DMTF1Q9Y222 760 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 NEU2Q9Y3R4 380 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 MRFAP1Q9Y605 127 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 SHROOM3Q8TF72 1996 aa11.27□□□□□ -0.61
TRAPPC4-211ENST00000533012 ZNF318Q5VUA4 2279 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 CAPN8A6NHC0 703 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 C10orf142B7Z368 130 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 PRAMEF26H0Y7S4 382 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 USP12O75317 370 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 SUN1O94901 812 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 CLDN7O95471 211 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 C6P13671 934 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 ITPKAP23677 461 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 AKT2P31751 481 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 PTGIRP43119 386 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 CHRNA4P43681 627 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 SARNPP82979 210 aaKnown RBP11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 CREB5Q02930 508 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 PTSQ03393 145 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 DHX34Q14147 1143 aaKnown RBP11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 STAT4Q14765 748 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 CNGA3Q16281 694 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 DENND2CQ68D51 928 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 PPP1R21Q6ZMI0 780 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 ZNF572Q7Z3I7 529 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 CYP2U1Q7Z449 544 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 TSPAN33Q86UF1 283 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 SYT12Q8IV01 421 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 CBARPQ8N350 705 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 SUMF1Q8NBK3 374 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 PIGKQ92643 395 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 LENG8Q96PV6 779 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 SMIM14Q96QK8 99 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 APOL2Q9BQE5 337 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 GPR63Q9BZJ6 419 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 EBF2Q9HAK2 575 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 ZFYVE1Q9HBF4 777 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 ARNT2Q9HBZ2 717 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 KCTD5Q9NXV2 234 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 HACD3Q9P035 362 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 GMEB2Q9UKD1 530 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 PCDHGA5Q9Y5G8 931 aa11.26□□□□□ -0.61
TRAPPC4-211ENST00000533012 C1orf232A0A0U1RR37 186 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 GOLGA8CPA6NN73 597 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 PRR5-ARHGAP8B1AHC4 643 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 PROB1E7EW31 1015 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 AP3B1O00203 1094 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 PSMD11O00231 422 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 WNT9AO14904 365 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 BCAT2O15382 392 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 RECQL5O94762 991 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 RETP07949 1114 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 PIRTP0C851 137 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 HNRNPA2B1P22626 353 aaKnown RBP11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 LHCGRP22888 699 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 TUBB4BP68371 445 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 CDK16Q00536 496 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 NHLH1Q02575 133 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 C2orf54Q08AI8 447 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 OLIG2Q13516 323 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 PTK6Q13882 451 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 LRRC14Q15048 493 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 CDKN3Q16667 212 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 KCTD19Q17RG1 926 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 LRRC66Q68CR7 880 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 TMC3Q7Z5M5 1100 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 PCGF5Q86SE9 256 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 RAVER1Q8IY67 606 aaKnown RBP11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 DNAAF3Q8N9W5 541 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 CEP76Q8TAP6 659 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 BRSK1Q8TDC3 778 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 BLOC1S5Q8TDH9 187 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 SKA1Q96BD8 255 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 SERAC1Q96JX3 654 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 ARRDC1-AS1Q9H2J1 176 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 EIF2B3Q9NR50 452 aaKnown RBP11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 SUSD2Q9UGT4 822 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 ASIC3Q9UHC3 531 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 RAPGEFL1Q9UHV5 662 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 PILRBQ9UKJ0 227 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 SHOC2Q9UQ13 582 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 COQ6Q9Y2Z9 468 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 ZNF711Q9Y462 761 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 HS3ST3A1Q9Y663 406 aa11.25□□□□□ -0.61
TRAPPC4-211ENST00000533012 A0A0U1RQS6 177 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 A0A1B0GTW7 788 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 CTAGE15A4D2H0 777 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 RGSL1A5PLK6 1076 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 FAM187AA6NFU0 413 aa11.24□□□□□ -0.61
TRAPPC4-211ENST00000533012 C2orf81A6NN90 581 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms