RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 ARHGEF17Q96PE2 2063 aaPredicted RBP17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 TENM4Q6N022 2769 aa17.15■□□□□ 0.34
RPUSD4-207ENST00000532800 B4DGG1 531 aa17.14■□□□□ 0.33
RPUSD4-207ENST00000532800 CACNB4O00305 520 aaPredicted RBP17.14■□□□□ 0.33
RPUSD4-207ENST00000532800 PRPSAP2O60256 369 aa17.14■□□□□ 0.33
RPUSD4-207ENST00000532800 NOBOXO60393 691 aa17.14■□□□□ 0.33
RPUSD4-207ENST00000532800 LRCH4O75427 683 aa17.14■□□□□ 0.33
RPUSD4-207ENST00000532800 SLC5A2P31639 672 aa17.14■□□□□ 0.33
RPUSD4-207ENST00000532800 DPYSQ14117 519 aa17.14■□□□□ 0.33
RPUSD4-207ENST00000532800 ASIC2Q16515 512 aa17.14■□□□□ 0.33
RPUSD4-207ENST00000532800 ZNF571Q7Z3V5 609 aaPredicted RBP17.14■□□□□ 0.33
RPUSD4-207ENST00000532800 CCNJLQ8IV13 435 aa17.14■□□□□ 0.33
RPUSD4-207ENST00000532800 FAM46DQ8NEK8 389 aa17.14■□□□□ 0.33
RPUSD4-207ENST00000532800 WBP1Q96G27 269 aa17.14■□□□□ 0.33
RPUSD4-207ENST00000532800 HAUS4Q9H6D7 363 aa17.14■□□□□ 0.33
RPUSD4-207ENST00000532800 CWC15Q9P013 229 aaKnown RBP17.14■□□□□ 0.33
RPUSD4-207ENST00000532800 B4GALT6Q9UBX8 382 aa17.14■□□□□ 0.33
RPUSD4-207ENST00000532800 MYO6Q9UM54 1294 aa17.14■□□□□ 0.33
RPUSD4-207ENST00000532800 AHCTF1Q8WYP5 2266 aa17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 RNF8O76064 485 aa17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 FTLP02792 175 aaPredicted RBP17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 CCKBRP32239 447 aa17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 TRIM23P36406 574 aa17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 NSUN2Q08J23 767 aaKnown RBP eCLIP17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 SLC10A7Q0GE19 358 aa17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 SRSF6Q13247 344 aaKnown RBP17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 RFTN1Q14699 578 aaPredicted RBP17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 LBRQ14739 615 aaKnown RBP17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 ACOX1Q15067 660 aa17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 CERCAMQ5T4B2 595 aa17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 TMCO4Q5TGY1 634 aa17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 PPP1R2P3Q6NXS1 205 aa17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 OGFOD3Q6PK18 319 aa17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 CCDC81Q6ZN84 652 aa17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 JAMLQ86YT9 394 aa17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 OR6C4Q8NGE1 309 aa17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 FNIP1Q8TF40 1166 aa17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 ZNF653Q96CK0 615 aa17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 PSKH2Q96QS6 385 aa17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 STRADBQ9C0K7 418 aa17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 WDR26Q9H7D7 661 aa17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 SUDS3Q9H7L9 328 aaPredicted RBP17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 CYP4F12Q9HCS2 524 aa17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 CNOT8Q9UFF9 292 aaKnown RBP17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 SEPT3Q9UH03 358 aa17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 MOSPD1Q9UJG1 213 aa17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 RNF215Q9Y6U7 377 aa17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 ASH1LQ9NR48 2969 aaKnown RBP17.13■□□□□ 0.33
RPUSD4-207ENST00000532800 PIEZO2Q9H5I5 2752 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 PRSS38A1L453 326 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 DDX3XO00571 662 aaKnown RBP eCLIP17.12■□□□□ 0.335e-7■□□□□ 10.7
RPUSD4-207ENST00000532800 EFSO43281 561 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 KRT10P13645 584 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 TCF4P15884 667 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 GLB1P16278 677 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 ITIH1P19827 911 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 IL1R2P27930 398 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 AP1S1P61966 158 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 TYRO3Q06418 890 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 EIF3IQ13347 325 aaKnown RBP17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 HLTFQ14527 1009 aaKnown RBP eCLIP17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 TGIF1Q15583 401 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 CNGA3Q16281 694 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 SMTNL2Q2TAL5 461 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 C14orf28Q4W4Y0 310 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 SPECC1LQ69YQ0 1117 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 PNCKQ6P2M8 343 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 TMPRSS9Q7Z410 1059 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 SPRED1Q7Z699 444 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 PGBD5Q8N414 524 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 COQ10AQ96MF6 247 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 TMEM74Q96NL1 305 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 GBP4Q96PP9 640 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 ETNK2Q9NVF9 386 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 PISDQ9UG56 409 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 APPL1Q9UKG1 709 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 LOXL2Q9Y4K0 774 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 PCDHGC4Q9Y5F7 938 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 PCDHGA7Q9Y5G6 932 aa17.12■□□□□ 0.33
RPUSD4-207ENST00000532800 TMX2-CTNND1H3BSU7 103 aa17.11■□□□□ 0.33
RPUSD4-207ENST00000532800 TNFRSF10CO14798 259 aa17.11■□□□□ 0.33
RPUSD4-207ENST00000532800 PEX11BO96011 259 aa17.11■□□□□ 0.33
RPUSD4-207ENST00000532800 HOXC4P09017 264 aaPredicted RBP17.11■□□□□ 0.33
RPUSD4-207ENST00000532800 AMPD1P23109 780 aa17.11■□□□□ 0.33
RPUSD4-207ENST00000532800 KELP23276 732 aa17.11■□□□□ 0.33
RPUSD4-207ENST00000532800 HCAR3P49019 387 aa17.11■□□□□ 0.33
RPUSD4-207ENST00000532800 POLR2LP62875 67 aaKnown RBP17.11■□□□□ 0.33
RPUSD4-207ENST00000532800 ZNF235Q14590 738 aa17.11■□□□□ 0.33
RPUSD4-207ENST00000532800 PTPRRQ15256 657 aa17.11■□□□□ 0.33
RPUSD4-207ENST00000532800 CCDC183Q5T5S1 534 aa17.11■□□□□ 0.33
RPUSD4-207ENST00000532800 DENND2CQ68D51 928 aa17.11■□□□□ 0.33
RPUSD4-207ENST00000532800 PSTKQ8IV42 348 aaKnown RBP17.11■□□□□ 0.33
RPUSD4-207ENST00000532800 PDCD6IPQ8WUM4 868 aaKnown RBP17.11■□□□□ 0.33
RPUSD4-207ENST00000532800 NUS1Q96E22 293 aa17.11■□□□□ 0.33
RPUSD4-207ENST00000532800 CCNL2Q96S94 520 aaPredicted RBP17.11■□□□□ 0.33
RPUSD4-207ENST00000532800 DPEP2Q9H4A9 486 aa17.11■□□□□ 0.33
RPUSD4-207ENST00000532800 LRIT1Q9P2V4 623 aa17.11■□□□□ 0.33
RPUSD4-207ENST00000532800 MYO1AQ9UBC5 1043 aa17.11■□□□□ 0.33
RPUSD4-207ENST00000532800 FLNBO75369 2602 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms