RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 SLC39A13Q96H72 371 aa8.45□□□□□ -1.06
CDC27-208ENST00000532575 C1orf159Q96HA4 380 aa8.45□□□□□ -1.06
CDC27-208ENST00000532575 CCDC34Q96HJ3 373 aa8.45□□□□□ -1.06
CDC27-208ENST00000532575 BTN2A3PQ96KV6 586 aa8.45□□□□□ -1.06
CDC27-208ENST00000532575 DIRC2Q96SL1 478 aa8.45□□□□□ -1.06
CDC27-208ENST00000532575 AARSD1Q9BTE6 412 aaKnown RBP8.45□□□□□ -1.06
CDC27-208ENST00000532575 CPNE5Q9HCH3 593 aa8.45□□□□□ -1.06
CDC27-208ENST00000532575 NCKIPSDQ9NZQ3 722 aa8.45□□□□□ -1.06
CDC27-208ENST00000532575 TMEFF2Q9UIK5 374 aaPredicted RBP8.45□□□□□ -1.06
CDC27-208ENST00000532575 PCDHB1Q9Y5F3 818 aa8.45□□□□□ -1.06
CDC27-208ENST00000532575 CFAP46Q8IYW2 2715 aa8.45□□□□□ -1.06
CDC27-208ENST00000532575 MUC22E2RYF6 1773 aaPredicted RBP8.44□□□□□ -1.06
CDC27-208ENST00000532575 A0A1B0GVL5 298 aa8.44□□□□□ -1.06
CDC27-208ENST00000532575 C7orf72A4D263 438 aa8.44□□□□□ -1.06
CDC27-208ENST00000532575 F5H5T6 163 aa8.44□□□□□ -1.06
CDC27-208ENST00000532575 M0QYV0 167 aa8.44□□□□□ -1.06
CDC27-208ENST00000532575 MCF2LO15068 1137 aa8.44□□□□□ -1.06
CDC27-208ENST00000532575 ARHGAP6O43182 974 aa8.44□□□□□ -1.06
CDC27-208ENST00000532575 RTN2O75298 545 aa8.44□□□□□ -1.06
CDC27-208ENST00000532575 CSO75390 466 aaKnown RBP8.44□□□□□ -1.06
CDC27-208ENST00000532575 SLC2A3P11169 496 aa8.44□□□□□ -1.06
CDC27-208ENST00000532575 TACR2P21452 398 aa8.44□□□□□ -1.06
CDC27-208ENST00000532575 SYKP43405 635 aa8.44□□□□□ -1.06
CDC27-208ENST00000532575 RGS7P49802 495 aa8.44□□□□□ -1.06
CDC27-208ENST00000532575 CORO7P57737 925 aa8.44□□□□□ -1.06
CDC27-208ENST00000532575 HNRNPKP61978 463 aaKnown RBP eCLIP8.44□□□□□ -1.06
CDC27-208ENST00000532575 ZCWPW2Q504Y3 356 aa8.44□□□□□ -1.06
CDC27-208ENST00000532575 DCAF17Q5H9S7 520 aaPredicted RBP8.44□□□□□ -1.06
CDC27-208ENST00000532575 TMC6Q7Z403 805 aa8.44□□□□□ -1.06
CDC27-208ENST00000532575 ATP6V0D2Q8N8Y2 350 aa8.44□□□□□ -1.06
CDC27-208ENST00000532575 DQX1Q8TE96 717 aaKnown RBP8.44□□□□□ -1.06
CDC27-208ENST00000532575 FAM149B1Q96BN6 582 aa8.44□□□□□ -1.06
CDC27-208ENST00000532575 MYEOVQ96EZ4 313 aa8.44□□□□□ -1.06
CDC27-208ENST00000532575 VCPIP1Q96JH7 1222 aa8.44□□□□□ -1.06
CDC27-208ENST00000532575 APOLD1Q96LR9 279 aa8.44□□□□□ -1.06
CDC27-208ENST00000532575 MIS12Q9H081 205 aa8.44□□□□□ -1.06
CDC27-208ENST00000532575 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.44□□□□□ -1.061e-7■■■□□ 17.7
CDC27-208ENST00000532575 NLGN3Q9NZ94 848 aa8.44□□□□□ -1.06
CDC27-208ENST00000532575 SLC25A13Q9UJS0 675 aa8.44□□□□□ -1.06
CDC27-208ENST00000532575 MAST4O15021 2626 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 A0A1B0GVM2 712 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 TCAF2A6NFQ2 919 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 K7ENP7 123 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 SCAMP1O15126 338 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 SLC16A3O15427 465 aaKnown RBP8.43□□□□□ -1.06
CDC27-208ENST00000532575 SLC31A1O15431 190 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 FFAR2O15552 330 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 SLC28A2O43868 658 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 PIAS2O75928 621 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 FYNP06241 537 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 PDGFRAP16234 1089 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 HNRNPA2B1P22626 353 aaKnown RBP8.43□□□□□ -1.06
CDC27-208ENST00000532575 ARL4AP40617 200 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 ACADSBP45954 432 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 STK19P49842 368 aaPredicted RBP8.43□□□□□ -1.06
CDC27-208ENST00000532575 ERVFRD-1P60508 538 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 CETN1Q12798 172 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 CNTN1Q12860 1018 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 LY6DQ14210 128 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 ISXQ2M1V0 245 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 POM121L1PQ3SYA9 428 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 CBWD6Q4V339 395 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 CBWD3Q5JTY5 395 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 RABGAP1LQ5R372 815 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 CBWD5Q5RIA9 395 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 SLC35F1Q5T1Q4 408 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 AGBL4Q5VU57 503 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 RAP1GAP2Q684P5 730 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 DENND5AQ6IQ26 1287 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 OGFOD2Q6N063 350 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 INO80CQ6PI98 192 aaPredicted RBP8.43□□□□□ -1.06
CDC27-208ENST00000532575 TMEM270Q6UE05 265 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 CCDC103Q8IW40 242 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 CCAR2Q8N163 923 aaKnown RBP8.43□□□□□ -1.06
CDC27-208ENST00000532575 MAPK15Q8TD08 544 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 TFAP2BQ92481 460 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 CCDC114Q96M63 670 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 SLC46A1Q96NT5 459 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 MED15Q96RN5 788 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 TSG101Q99816 390 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 TNFRSF12AQ9NP84 129 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 ASCL3Q9NQ33 180 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 DYRK4Q9NR20 520 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 UCKL1Q9NWZ5 548 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 SARDHQ9UL12 918 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 NAALADL1Q9UQQ1 740 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 PCDHB4Q9Y5E5 795 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 PCDHGA8Q9Y5G5 932 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 HS3ST3A1Q9Y663 406 aa8.43□□□□□ -1.06
CDC27-208ENST00000532575 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.42□□□□□ -1.06
CDC27-208ENST00000532575 TRAV20A0A0B4J274 112 aa8.42□□□□□ -1.06
CDC27-208ENST00000532575 OR14I1A6ND48 311 aa8.42□□□□□ -1.06
CDC27-208ENST00000532575 KCNU1A8MYU2 1149 aa8.42□□□□□ -1.06
CDC27-208ENST00000532575 K7ESM1 405 aa8.42□□□□□ -1.06
CDC27-208ENST00000532575 PRODHO43272 600 aa8.42□□□□□ -1.06
CDC27-208ENST00000532575 DLX3O60479 287 aa8.42□□□□□ -1.06
CDC27-208ENST00000532575 HSP90AA1P07900 732 aaKnown RBP8.42□□□□□ -1.06
CDC27-208ENST00000532575 TACR1P25103 407 aa8.42□□□□□ -1.06
CDC27-208ENST00000532575 RPL34P49207 117 aaKnown RBP8.42□□□□□ -1.06
CDC27-208ENST00000532575 CSRP3P50461 194 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms