RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 XAB2Q9HCS7 855 aaKnown RBP12.57□□□□□ -0.4
COPB1-208ENST00000532088 CASS4Q9NQ75 786 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 FAM114A2Q9NRY5 505 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 C2orf42Q9NWW7 574 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 UBP1Q9NZI7 540 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 HACD3Q9P035 362 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 CHKBQ9Y259 395 aa12.57□□□□□ -0.4
COPB1-208ENST00000532088 A0A0J9YYE9 177 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 CAPN8A6NHC0 703 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 H0Y858 1186 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 AREL1O15033 823 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 PPFIA2O75334 1257 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 TRBC1P01850 177 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 PDHA1P08559 390 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 CYP2A6P11509 494 aaPredicted RBP12.56□□□□□ -0.4
COPB1-208ENST00000532088 TDGF1P13385 188 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 ZNF30P17039 623 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 P2RY2P41231 377 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 RPL21P46778 160 aaKnown RBP12.56□□□□□ -0.4
COPB1-208ENST00000532088 EPHB1P54762 984 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 LAMB3Q13751 1172 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 PCSK7Q16549 785 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 ZNF528Q3MIS6 628 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 SIRPB2Q5JXA9 342 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 PIP5KL1Q5T9C9 394 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 AGBL4Q5VU57 503 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 DENND5AQ6IQ26 1287 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 ANO7Q6IWH7 933 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 ERAP2Q6P179 960 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 NEK5Q6P3R8 708 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 FBXL19Q6PCT2 694 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 KIAA1324Q6UXG2 1013 aaKnown RBP12.56□□□□□ -0.4
COPB1-208ENST00000532088 ZSWIM9Q86XI8 627 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 HDDC3Q8N4P3 179 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.56□□□□□ -0.4
COPB1-208ENST00000532088 LPCAT1Q8NF37 534 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 MDGA1Q8NFP4 955 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 PDCD6IPQ8WUM4 868 aaKnown RBP12.56□□□□□ -0.4
COPB1-208ENST00000532088 HHIPQ96QV1 700 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 OMDQ99983 421 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 FICDQ9BVA6 458 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 FOXP3Q9BZS1 431 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 C11orf16Q9NQ32 467 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 FBXL12Q9NXK8 326 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 BCCIPQ9P287 314 aaKnown RBP eCLIP12.56□□□□□ -0.4
COPB1-208ENST00000532088 ATG2BQ96BY7 2078 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 ANKRD36A6QL64 1941 aa12.56□□□□□ -0.4
COPB1-208ENST00000532088 C10orf142B7Z368 130 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 F5H423 210 aaPredicted RBP12.55□□□□□ -0.4
COPB1-208ENST00000532088 PSMD11O00231 422 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 TP73O15350 636 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 TSPAN6O43657 245 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 PLRG1O43660 514 aaKnown RBP12.55□□□□□ -0.4
COPB1-208ENST00000532088 TMEM63AO94886 807 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 AGTP01019 485 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 XPAP23025 273 aaPredicted RBP12.55□□□□□ -0.4
COPB1-208ENST00000532088 MAGEA3P43357 314 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 NPY2RP49146 381 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 ITGA8P53708 1063 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 CNTN1Q12860 1018 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 CUL1Q13616 776 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 TMEM52BQ4KMG9 183 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 FAM182AQ5T1J6 154 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 DPPA4Q7L190 304 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 TTC7BQ86TV6 843 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 WDR5BQ86VZ2 330 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 IFT20Q8IY31 132 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 PAF1Q8N7H5 531 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 ART4Q93070 314 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 RMDN1Q96DB5 314 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 PCED1AQ9H1Q7 454 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 PREBQ9HCU5 417 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 GDF3Q9NR23 364 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 POLR3BQ9NW08 1133 aaPredicted RBP12.55□□□□□ -0.4
COPB1-208ENST00000532088 GRHL1Q9NZI5 618 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 ANAPC5Q9UJX4 755 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 SNX24Q9Y343 169 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 FADS3Q9Y5Q0 445 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 MUC3AQ02505 3323 aa12.55□□□□□ -0.4
COPB1-208ENST00000532088 TTC28Q96AY4 2481 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 A0A1W2PP55 124 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 TCRBV7S3A2A0A539 114 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 RNASEH2AO75792 299 aaKnown RBP12.54□□□□□ -0.4
COPB1-208ENST00000532088 TUBBP07437 444 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 VIPR1P32241 457 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 MMP12P39900 470 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 TPMTP51580 245 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 METAP1P53582 386 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 PDE1BQ01064 536 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 SLC7A5Q01650 507 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 GUCY2DQ02846 1103 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 MSLNQ13421 630 aaPredicted RBP12.54□□□□□ -0.4
COPB1-208ENST00000532088 GALNT3Q14435 633 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 TMEM31Q5JXX7 168 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 ANKRD22Q5VYY1 191 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 KIAA1161Q6NSJ0 714 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 CEP128Q6ZU80 1094 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 ZNF534Q76KX8 674 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 C11orf74Q86VG3 221 aa12.54□□□□□ -0.4
COPB1-208ENST00000532088 LONP2Q86WA8 852 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms