RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 SEMG2Q02383 582 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 CYP4F3Q08477 520 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 C1orf61Q13536 156 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 PDK1Q15118 436 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 CDKN3Q16667 212 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 LRRC38Q5VT99 294 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 DENND2CQ68D51 928 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 NCBP2-AS2Q69YL0 99 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 LRRC69Q6ZNQ3 347 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 ZSWIM9Q86XI8 627 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 TP53INP2Q8IXH6 220 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 CCDC13Q8IYE1 715 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 TEX26Q8N6G2 289 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 OR56A4Q8NGH8 313 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 PCDH19Q8TAB3 1148 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 MDM1Q8TC05 714 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 VOPP1Q96AW1 172 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 SCRN2Q96FV2 425 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 TSGA13Q96PP4 275 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 CHP1Q99653 195 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 BRD8Q9H0E9 1235 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.61□□□□□ -0.39
C11orf54-210ENST00000531516 OR1A2Q9Y585 309 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 RAI2Q9Y5P3 530 aa12.61□□□□□ -0.39
C11orf54-210ENST00000531516 COL5A1P20908 1838 aaPredicted RBP12.6□□□□□ -0.39
C11orf54-210ENST00000531516 MTA2O94776 668 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 HEXIM1O94992 359 aaKnown RBP12.6□□□□□ -0.39
C11orf54-210ENST00000531516 PEX11BO96011 259 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 KRT1P04264 644 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 ZNF30P17039 623 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 MAGEA1P43355 309 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 ARSEP51690 589 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 TAS2R40P59535 323 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 RPL26P61254 145 aaKnown RBP12.6□□□□□ -0.39
C11orf54-210ENST00000531516 INSM1Q01101 510 aaPredicted RBP12.6□□□□□ -0.39
C11orf54-210ENST00000531516 RALGDSQ12967 914 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 BIRC2Q13490 618 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 TFDP2Q14188 446 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 ATP13A4Q4VNC1 1196 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 C6orf132Q5T0Z8 1188 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 CCDC70Q6NSX1 233 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 PNCKQ6P2M8 343 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 KDM7AQ6ZMT4 941 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 EFL1Q7Z2Z2 1120 aaKnown RBP12.6□□□□□ -0.39
C11orf54-210ENST00000531516 RFX6Q8HWS3 928 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 CCDC170Q8IYT3 715 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 RBFAQ8N0V3 343 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 LSMEM2Q8N112 164 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 TSACCQ96A04 125 aaPredicted RBP12.6□□□□□ -0.39
C11orf54-210ENST00000531516 FAF2Q96CS3 445 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 HDAC11Q96DB2 347 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 CALR3Q96L12 384 aaKnown RBP12.6□□□□□ -0.39
C11orf54-210ENST00000531516 RNF157Q96PX1 679 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 LRRC61Q9BV99 259 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 ADGRE3Q9BY15 652 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 GULP1Q9UBP9 304 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 KLF15Q9UIH9 416 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 RPL26L1Q9UNX3 145 aaKnown RBP12.6□□□□□ -0.39
C11orf54-210ENST00000531516 GPR34Q9UPC5 381 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 HEY1Q9Y5J3 304 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 DGKBQ9Y6T7 804 aa12.6□□□□□ -0.39
C11orf54-210ENST00000531516 TTC24A2A3L6 582 aaPredicted RBP12.59□□□□□ -0.39
C11orf54-210ENST00000531516 EME2A4GXA9 379 aaPredicted RBP12.59□□□□□ -0.39
C11orf54-210ENST00000531516 YY2O15391 372 aa12.59□□□□□ -0.39
C11orf54-210ENST00000531516 MYCLP1P12525 358 aaPredicted RBP12.59□□□□□ -0.39
C11orf54-210ENST00000531516 TNNT1P13805 278 aa12.59□□□□□ -0.39
C11orf54-210ENST00000531516 ACTN2P35609 894 aa12.59□□□□□ -0.39
C11orf54-210ENST00000531516 AP1B1Q10567 949 aa12.59□□□□□ -0.39
C11orf54-210ENST00000531516 TRAF2Q12933 501 aa12.59□□□□□ -0.39
C11orf54-210ENST00000531516 ALG11Q2TAA5 492 aa12.59□□□□□ -0.39
C11orf54-210ENST00000531516 RAET1GQ6H3X3 334 aa12.59□□□□□ -0.39
C11orf54-210ENST00000531516 TAF8Q7Z7C8 310 aa12.59□□□□□ -0.39
C11orf54-210ENST00000531516 PGBD5Q8N414 524 aa12.59□□□□□ -0.39
C11orf54-210ENST00000531516 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.59□□□□□ -0.39
C11orf54-210ENST00000531516 ARL10Q8N8L6 244 aa12.59□□□□□ -0.39
C11orf54-210ENST00000531516 DCBLD1Q8N8Z6 715 aa12.59□□□□□ -0.39
C11orf54-210ENST00000531516 KIAA1524Q8TCG1 905 aa12.59□□□□□ -0.39
C11orf54-210ENST00000531516 CCHCR1Q8TD31 782 aa12.59□□□□□ -0.39
C11orf54-210ENST00000531516 MAML1Q92585 1016 aa12.59□□□□□ -0.39
C11orf54-210ENST00000531516 FERMT1Q9BQL6 677 aa12.59□□□□□ -0.39
C11orf54-210ENST00000531516 BOCQ9BWV1 1114 aa12.59□□□□□ -0.39
C11orf54-210ENST00000531516 SYNDIG1Q9H7V2 258 aa12.59□□□□□ -0.39
C11orf54-210ENST00000531516 PADI4Q9UM07 663 aa12.59□□□□□ -0.39
C11orf54-210ENST00000531516 TMX2-CTNND1H3BSU7 103 aa12.58□□□□□ -0.4
C11orf54-210ENST00000531516 GCATO75600 419 aa12.58□□□□□ -0.4
C11orf54-210ENST00000531516 TCEA3O75764 348 aa12.58□□□□□ -0.4
C11orf54-210ENST00000531516 MAP3K6O95382 1288 aa12.58□□□□□ -0.4
C11orf54-210ENST00000531516 JCHAINP01591 159 aa12.58□□□□□ -0.4
C11orf54-210ENST00000531516 GIMD1P0DJR0 217 aa12.58□□□□□ -0.4
C11orf54-210ENST00000531516 TRIM23P36406 574 aa12.58□□□□□ -0.4
C11orf54-210ENST00000531516 GPR1P46091 355 aa12.58□□□□□ -0.4
C11orf54-210ENST00000531516 NR2C2P49116 596 aa12.58□□□□□ -0.4
C11orf54-210ENST00000531516 NAP1L1P55209 391 aaKnown RBP12.58□□□□□ -0.4
C11orf54-210ENST00000531516 ILF3Q12906 894 aaKnown RBP eCLIP12.58□□□□□ -0.4
C11orf54-210ENST00000531516 CAMK2BQ13554 666 aa12.58□□□□□ -0.4
C11orf54-210ENST00000531516 TCEAL1Q15170 157 aa12.58□□□□□ -0.4
C11orf54-210ENST00000531516 CNGA3Q16281 694 aa12.58□□□□□ -0.4
C11orf54-210ENST00000531516 TPRG1LQ5T0D9 272 aa12.58□□□□□ -0.4
C11orf54-210ENST00000531516 RBM44Q6ZP01 1051 aaKnown RBP12.58□□□□□ -0.4
C11orf54-210ENST00000531516 RAVER1Q8IY67 606 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms