RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 PIGKQ92643 395 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 SLCO2A1Q92959 643 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 COQ10AQ96MF6 247 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 AP1M1Q9BXS5 423 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 MAGEE1Q9HCI5 957 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 TM9SF3Q9HD45 589 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 GPR27Q9NS67 375 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 UBP1Q9NZI7 540 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 HS3ST3A1Q9Y663 406 aa14.51□□□□□ -0.09
CPSF1-206ENST00000531480 CFAP54Q96N23 3096 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 ERI2A8K979 691 aaKnown RBP14.5□□□□□ -0.09
CPSF1-206ENST00000531480 PDE2AO00408 941 aaPredicted RBP14.5□□□□□ -0.09
CPSF1-206ENST00000531480 WNT9AO14904 365 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 PHF2O75151 1096 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 TM7SF2O76062 418 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 ALPIP09923 528 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 GNSP15586 552 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 HLA-DPA1P20036 260 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 HNRNPA2B1P22626 353 aaKnown RBP14.5□□□□□ -0.09
CPSF1-206ENST00000531480 MAT2AP31153 395 aaKnown RBP14.5□□□□□ -0.09
CPSF1-206ENST00000531480 FDFT1P37268 417 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 COILP38432 576 aaPredicted RBP14.5□□□□□ -0.09
CPSF1-206ENST00000531480 KCNJ1P48048 391 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 AFF3P51826 1226 aaKnown RBP14.5□□□□□ -0.09
CPSF1-206ENST00000531480 LMNB2Q03252 620 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 PTSQ03393 145 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 OVGP1Q12889 678 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 PRPSAP1Q14558 356 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 PTPRRQ15256 657 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 DENND5AQ6IQ26 1287 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 CRTC1Q6UUV9 634 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 ABI3BPQ7Z7G0 1075 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 IQCHQ86VS3 1027 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 RGL4Q8IZJ4 473 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 TP53I13Q8NBR0 393 aaPredicted RBP14.5□□□□□ -0.09
CPSF1-206ENST00000531480 LPCAT1Q8NF37 534 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 FAM174AQ8TBP5 190 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 MAGOHBQ96A72 148 aaKnown RBP14.5□□□□□ -0.09
CPSF1-206ENST00000531480 SMIM14Q96QK8 99 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 SRPK1Q96SB4 655 aaKnown RBP14.5□□□□□ -0.09
CPSF1-206ENST00000531480 PARD6AQ9NPB6 346 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 KCTD5Q9NXV2 234 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 PAK5Q9P286 719 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 NCDNQ9UBB6 729 aa14.5□□□□□ -0.09
CPSF1-206ENST00000531480 SPTBN4Q9H254 2564 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 ATXN2Q99700 1313 aaKnown RBP14.49□□□□□ -0.09
CPSF1-206ENST00000531480 ZNF106Q9H2Y7 1883 aaKnown RBP14.49□□□□□ -0.09
CPSF1-206ENST00000531480 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.49□□□□□ -0.09
CPSF1-206ENST00000531480 GOLGA6L10A0A0M3HER8 536 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 VILLO15195 856 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 RAD51BO15315 384 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 SUN1O94901 812 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 AP2A1O95782 977 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 PAK4O96013 591 aaPredicted RBP14.49□□□□□ -0.09
CPSF1-206ENST00000531480 FGF1P05230 155 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 ELFN1P0C7U0 828 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 ETS1P14921 441 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 CTPS1P17812 591 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 RPL22P35268 128 aaKnown RBP14.49□□□□□ -0.09
CPSF1-206ENST00000531480 STC1P52823 247 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 EPHB1P54762 984 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 SEMA5AQ13591 1074 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 GALNT3Q14435 633 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 PCSK7Q16549 785 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 SIRPB2Q5JXA9 342 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 CCDC137Q6PK04 289 aaKnown RBP14.49□□□□□ -0.09
CPSF1-206ENST00000531480 TECPR1Q7Z6L1 1165 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 TSPAN33Q86UF1 283 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 ZCCHC9Q8N567 271 aaKnown RBP14.49□□□□□ -0.09
CPSF1-206ENST00000531480 GPR161Q8N6U8 529 aaKnown RBP14.49□□□□□ -0.09
CPSF1-206ENST00000531480 MFSD2AQ8NA29 543 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 MNS1Q8NEH6 495 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 SNX19Q92543 992 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 EID2BQ96D98 161 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 IFT43Q96FT9 208 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 SERAC1Q96JX3 654 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 SLC6A18Q96N87 628 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 WRAP53Q9BUR4 548 aaKnown RBP14.49□□□□□ -0.09
CPSF1-206ENST00000531480 SEMA4GQ9NTN9 838 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 PCYOX1Q9UHG3 505 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 BPTFQ12830 3046 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 ADAMTS9Q9P2N4 1935 aa14.49□□□□□ -0.09
CPSF1-206ENST00000531480 KNL1Q8NG31 2342 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 PATE3B3GLJ2 98 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 TOR1BO14657 336 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 SLC31A1O15431 190 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 PSMD3O43242 534 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 FOXD2O60548 495 aaPredicted RBP14.48□□□□□ -0.09
CPSF1-206ENST00000531480 RECQL5O94762 991 aaPredicted RBP14.48□□□□□ -0.09
CPSF1-206ENST00000531480 AGTP01019 485 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 IFNB1P01574 187 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 WNT1P04628 370 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 CD38P28907 300 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 AKT2P31751 481 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 ACTN2P35609 894 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 MAGEA6P43360 314 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 ID4P47928 161 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 BNC1Q01954 994 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 SEMG2Q02383 582 aa14.48□□□□□ -0.09
CPSF1-206ENST00000531480 DPTQ07507 201 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms