RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 WASF2Q9Y6W5 498 aa16.67■□□□□ 0.26
PACS1-209ENST00000529757 TMEM120BA0PK00 339 aa16.66■□□□□ 0.26
PACS1-209ENST00000529757 HMX2A2RU54 273 aa16.66■□□□□ 0.26
PACS1-209ENST00000529757 CAPN8A6NHC0 703 aa16.66■□□□□ 0.26
PACS1-209ENST00000529757 CCL22O00626 93 aa16.66■□□□□ 0.26
PACS1-209ENST00000529757 ITGA2BP08514 1039 aa16.66■□□□□ 0.26
PACS1-209ENST00000529757 ALPIP09923 528 aa16.66■□□□□ 0.26
PACS1-209ENST00000529757 PSMA3P25788 255 aa16.66■□□□□ 0.26
PACS1-209ENST00000529757 LIMK2P53671 638 aa16.66■□□□□ 0.26
PACS1-209ENST00000529757 ZNF234Q14588 700 aa16.66■□□□□ 0.26
PACS1-209ENST00000529757 PTPRRQ15256 657 aa16.66■□□□□ 0.26
PACS1-209ENST00000529757 AAK1Q2M2I8 961 aa16.66■□□□□ 0.26
PACS1-209ENST00000529757 KIAA0408Q6ZU52 694 aa16.66■□□□□ 0.26
PACS1-209ENST00000529757 LMNTD2Q8IXW0 634 aa16.66■□□□□ 0.26
PACS1-209ENST00000529757 OTUD6BQ8N6M0 293 aa16.66■□□□□ 0.26
PACS1-209ENST00000529757 ZNF366Q8N895 744 aa16.66■□□□□ 0.26
PACS1-209ENST00000529757 ALKBH8Q96BT7 664 aaKnown RBP16.66■□□□□ 0.26
PACS1-209ENST00000529757 LRIG1Q96JA1 1093 aa16.66■□□□□ 0.26
PACS1-209ENST00000529757 SERAC1Q96JX3 654 aa16.66■□□□□ 0.26
PACS1-209ENST00000529757 OSBPL1AQ9BXW6 950 aa16.66■□□□□ 0.26
PACS1-209ENST00000529757 GPR63Q9BZJ6 419 aa16.66■□□□□ 0.26
PACS1-209ENST00000529757 MTG2Q9H4K7 406 aa16.66■□□□□ 0.26
PACS1-209ENST00000529757 SSU72Q9NP77 194 aaKnown RBP16.66■□□□□ 0.26
PACS1-209ENST00000529757 POLR3BQ9NW08 1133 aaPredicted RBP16.66■□□□□ 0.26
PACS1-209ENST00000529757 IL36AQ9UHA7 158 aa16.66■□□□□ 0.26
PACS1-209ENST00000529757 SMG5Q9UPR3 1016 aaKnown RBP16.66■□□□□ 0.26
PACS1-209ENST00000529757 BRWD1Q9NSI6 2320 aa16.66■□□□□ 0.26
PACS1-209ENST00000529757 EDDM13A0A1B0GTR0 161 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 STX7O15400 261 aaKnown RBP16.65■□□□□ 0.26
PACS1-209ENST00000529757 BMP1P13497 986 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 HNF1BP35680 557 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 SLC1A2P43004 574 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 PPARDQ03181 441 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 HNRNPA1L2Q32P51 320 aaKnown RBP16.65■□□□□ 0.26
PACS1-209ENST00000529757 ARSIQ5FYB1 569 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 PRPF38BQ5VTL8 546 aaKnown RBP16.65■□□□□ 0.26
PACS1-209ENST00000529757 TIFABQ6ZNK6 161 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 LYSMD3Q7Z3D4 306 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 PTAR1Q7Z6K3 402 aaPredicted RBP16.65■□□□□ 0.26
PACS1-209ENST00000529757 DENND6AQ8IWF6 608 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 C2CD4AQ8NCU7 369 aaPredicted RBP16.65■□□□□ 0.26
PACS1-209ENST00000529757 MDM1Q8TC05 714 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 CDKN2AIPNLQ96HQ2 116 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 KLHL32Q96NJ5 620 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 CDX2Q99626 313 aaPredicted RBP16.65■□□□□ 0.26
PACS1-209ENST00000529757 MCMBPQ9BTE3 642 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 FBXO5Q9UKT4 447 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 PPIL1Q9Y3C6 166 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 MUC22E2RYF6 1773 aaPredicted RBP16.65■□□□□ 0.26
PACS1-209ENST00000529757 BPTFQ12830 3046 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 CCDC162PA2VCL2 907 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 PRPF4O43172 522 aaKnown RBP eCLIP16.65■□□□□ 0.26
PACS1-209ENST00000529757 SPAG7O75391 227 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 LEFTY1O75610 366 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 RFPL1O75677 317 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 GOT2P00505 430 aaKnown RBP16.65■□□□□ 0.26
PACS1-209ENST00000529757 HMGCLP35914 325 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 SOX9P48436 509 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 POLR2LP62875 67 aaKnown RBP16.65■□□□□ 0.26
PACS1-209ENST00000529757 CTBP1Q13363 440 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 BRAT1Q6PJG6 821 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 SERPINA13PQ6UXR4 307 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 USP45Q70EL2 814 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 PLCD3Q8N3E9 789 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 LYSMD1Q96S90 227 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 KLF6Q99612 283 aaPredicted RBP16.65■□□□□ 0.26
PACS1-209ENST00000529757 TMEM245Q9H330 911 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 RHOJQ9H4E5 214 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 SUDS3Q9H7L9 328 aaPredicted RBP16.65■□□□□ 0.26
PACS1-209ENST00000529757 THAP10Q9P2Z0 257 aaPredicted RBP16.65■□□□□ 0.26
PACS1-209ENST00000529757 PKP3Q9Y446 797 aa16.65■□□□□ 0.26
PACS1-209ENST00000529757 C1orf232A0A0U1RR37 186 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 OR51F1A6NGY5 319 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 FAM47DPA6NHR8 397 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 GOLGA8RI6L899 631 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 AHSGP02765 367 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 CTSLP07711 333 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 F7P08709 466 aaPredicted RBP16.64■□□□□ 0.25
PACS1-209ENST00000529757 PYGBP11216 843 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 HLA-EP13747 358 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 CHN1P15882 459 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 MDH1P40925 334 aaKnown RBP16.64■□□□□ 0.25
PACS1-209ENST00000529757 HADHAP40939 763 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 MPP1Q00013 466 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 SLC18A2Q05940 514 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 MRNIPQ6NTE8 343 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 AFTPHQ6ULP2 937 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 SH2D5Q6ZV89 423 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 SUGP1Q8IWZ8 645 aaKnown RBP16.64■□□□□ 0.25
PACS1-209ENST00000529757 GPR150Q8NGU9 434 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 OR4L1Q8NH43 312 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 SCRN2Q96FV2 425 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 ATXN7L3BQ96GX2 97 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 VPS39Q96JC1 886 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 MCCC1Q96RQ3 725 aaPredicted RBP16.64■□□□□ 0.25
PACS1-209ENST00000529757 P2RY13Q9BPV8 354 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 CAPS2Q9BXY5 557 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 ZFYVE1Q9HBF4 777 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 NKIRAS1Q9NYS0 192 aa16.64■□□□□ 0.25
PACS1-209ENST00000529757 IL17CQ9P0M4 197 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms