RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 HAUS2Q9NVX0 235 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 TOR4AQ9NXH8 423 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 AMACRQ9UHK6 382 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 RSPH14Q9UHP6 348 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 CDC23Q9UJX2 597 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 PPM1HQ9ULR3 514 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 ITM2BQ9Y287 266 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 CA5BQ9Y2D0 317 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 KNTC1P50748 2209 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 FAM149AA5PLN7 773 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 ZNF500O60304 480 aaPredicted RBP11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 ADH1BP00325 375 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 IGLV3-19P01714 112 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 DNTTP04053 509 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 TUBB4AP04350 444 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 PRKCGP05129 697 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 IGHV4-34P06331 123 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 MMP2P08253 660 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 ACADMP11310 421 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 COILP38432 576 aaPredicted RBP11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 CSNK1DP48730 415 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 SKOR1P84550 965 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 SRSF1Q07955 248 aaKnown RBP eCLIP11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 C2orf54Q08AI8 447 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 NSUN2Q08J23 767 aaKnown RBP eCLIP11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 TRAF2Q12933 501 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 PTPRRQ15256 657 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 TTC31Q49AM3 519 aaPredicted RBP11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 AGBL4Q5VU57 503 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 CCDC137Q6PK04 289 aaKnown RBP11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 GDPD4Q6W3E5 623 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 ARHGEF18Q6ZSZ5 1173 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 PARS2Q7L3T8 475 aaKnown RBP11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 PID1Q7Z2X4 250 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 KLHL7Q8IXQ5 586 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 ZCCHC9Q8N567 271 aaKnown RBP11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 CCDC89Q8N998 374 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 SPATA22Q8NHS9 363 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 GANCQ8TET4 914 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 SNX19Q92543 992 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 KLK6Q92876 244 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 RTP4Q96DX8 246 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 KLHL32Q96NJ5 620 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 TUBGCP5Q96RT8 1024 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 RBM15Q96T37 977 aaKnown RBP eCLIP11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 VAT1Q99536 393 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 MYOCQ99972 504 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 GORASP1Q9BQQ3 440 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 ATP13A3Q9H7F0 1226 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 HOMER3Q9NSC5 361 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 FBXL12Q9NXK8 326 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 UBP1Q9NZI7 540 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 EIF2B4Q9UI10 523 aaKnown RBP11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 TRHDEQ9UKU6 1024 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 PCOLCE2Q9UKZ9 415 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 MRFAP1Q9Y605 127 aa11.63□□□□□ -0.55
CCDC90B-210ENST00000528149 ZNF106Q9H2Y7 1883 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 C5orf60A6NFR6 353 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 PMPCBO75439 489 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 ZNF189O75820 626 aaPredicted RBP11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 MT-CYBP00156 380 aaPredicted RBP11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 SYPP08247 313 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 ZSCAN5DPP0CG00 497 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 C5AR1P21730 350 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 ITGB7P26010 798 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 SERPINA4P29622 427 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 ABL2P42684 1182 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 FNTAP49354 379 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 VPS41P49754 854 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 ADPRHP54922 357 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 BCL2L1Q07817 233 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 TRIP13Q15645 432 aaPredicted RBP11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 PCSK7Q16549 785 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 ZNF805Q5CZA5 627 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 RALGPS1Q5JS13 557 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 CFAP58Q5T655 872 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 PIP5KL1Q5T9C9 394 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 FAM46CQ5VWP2 391 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 ITPRIPL1Q6GPH6 555 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 GSTA5Q7RTV2 222 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 RABEPKQ7Z6M1 372 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 PRPF39Q86UA1 669 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 ZSWIM9Q86XI8 627 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 PAF1Q8N7H5 531 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 TMIEQ8NEW7 156 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 PDCD6IPQ8WUM4 868 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 BIRC7Q96CA5 298 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 IMP4Q96G21 291 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 OXNAD1Q96HP4 312 aaPredicted RBP11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 SMIM14Q96QK8 99 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 OSBPL1AQ9BXW6 950 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 CPEB1Q9BZB8 566 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 MIR1-1HGQ9H1L0 117 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 SLC25A51Q9H1U9 297 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 FZD3Q9NPG1 666 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 RNF14Q9UBS8 474 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 DRG1Q9Y295 367 aaKnown RBP11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 PCDHGC4Q9Y5F7 938 aa11.62□□□□□ -0.55
CCDC90B-210ENST00000528149 TMEM131Q92545 1883 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms