RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 CNGA3Q16281 694 aa17.31■□□□□ 0.36
LMX1B-203ENST00000526117 RSPO4Q2I0M5 234 aaPredicted RBP17.31■□□□□ 0.36
LMX1B-203ENST00000526117 DRICH1Q6PGQ1 229 aaPredicted RBP17.31■□□□□ 0.36
LMX1B-203ENST00000526117 KDELC1Q6UW63 502 aa17.31■□□□□ 0.36
LMX1B-203ENST00000526117 DBX2Q6ZNG2 339 aa17.31■□□□□ 0.36
LMX1B-203ENST00000526117 PID1Q7Z2X4 250 aa17.31■□□□□ 0.36
LMX1B-203ENST00000526117 KLK6Q92876 244 aa17.31■□□□□ 0.36
LMX1B-203ENST00000526117 KLHDC7BQ96G42 594 aa17.31■□□□□ 0.36
LMX1B-203ENST00000526117 FZD3Q9NPG1 666 aa17.31■□□□□ 0.36
LMX1B-203ENST00000526117 FSCN3Q9NQT6 498 aa17.31■□□□□ 0.36
LMX1B-203ENST00000526117 TTC7AQ9ULT0 858 aaPredicted RBP17.31■□□□□ 0.36
LMX1B-203ENST00000526117 R3HDM2Q9Y2K5 976 aaKnown RBP17.31■□□□□ 0.36
LMX1B-203ENST00000526117 DCHS1Q96JQ0 3298 aa17.31■□□□□ 0.36
LMX1B-203ENST00000526117 LRRK1Q38SD2 2015 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 LOC285095A0A1B0GVY8 99 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 POM121BA6NF01 834 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 C4orf47A7E2U8 309 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 CES2O00748 559 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 KCNN4O15554 427 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 LIASO43766 372 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 PCDHGA12O60330 932 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 GCATO75600 419 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 PRKCGP05129 697 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 THEGLP0DJG4 465 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 STIP1P31948 543 aaKnown RBP17.3■□□□□ 0.36
LMX1B-203ENST00000526117 HNF1BP35680 557 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 IGFALSP35858 605 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 PUM1Q14671 1186 aaKnown RBP eCLIP17.3■□□□□ 0.36
LMX1B-203ENST00000526117 LRRC14Q15048 493 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 SIX1Q15475 284 aaPredicted RBP17.3■□□□□ 0.36
LMX1B-203ENST00000526117 QPCTQ16769 361 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 ANKRD20A2Q5SQ80 823 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 ANKRD20A1Q5TYW2 823 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 ANKRD20A3Q5VUR7 823 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 LAYNQ6UX15 382 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 NLRP8Q86W28 1048 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 RASGEF1CQ8N431 466 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 SPATA22Q8NHS9 363 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 ELF4Q99607 663 aaPredicted RBP17.3■□□□□ 0.36
LMX1B-203ENST00000526117 MLPHQ9BV36 600 aaPredicted RBP17.3■□□□□ 0.36
LMX1B-203ENST00000526117 GTPBP2Q9BX10 602 aaKnown RBP17.3■□□□□ 0.36
LMX1B-203ENST00000526117 GAREM1Q9H706 876 aa17.3■□□□□ 0.36
LMX1B-203ENST00000526117 TP53BP1Q12888 1972 aaPredicted RBP17.29■□□□□ 0.36
LMX1B-203ENST00000526117 A0A1B0GTQ1 180 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 H0Y8X5 98 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 LZTS3O60299 673 aaPredicted RBP17.29■□□□□ 0.36
LMX1B-203ENST00000526117 ANXA9O76027 345 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 RECQL5O94762 991 aaPredicted RBP17.29■□□□□ 0.36
LMX1B-203ENST00000526117 NDST3O95803 873 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 MT-CYBP00156 380 aaPredicted RBP17.29■□□□□ 0.36
LMX1B-203ENST00000526117 HOXC4P09017 264 aaPredicted RBP17.29■□□□□ 0.36
LMX1B-203ENST00000526117 TEAD1P28347 426 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 CCT8P50990 548 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 DPTQ07507 201 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 MTM1Q13496 603 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 ARHGEF7Q14155 803 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 CCNG2Q16589 344 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 CDKN3Q16667 212 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 WSCD2Q2TBF2 565 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 ZNF569Q5MCW4 686 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 ESRP1Q6NXG1 681 aaKnown RBP17.29■□□□□ 0.36
LMX1B-203ENST00000526117 CRTC1Q6UUV9 634 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 ZNF765Q7L2R6 523 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 SPATS2Q86XZ4 545 aaKnown RBP17.29■□□□□ 0.36
LMX1B-203ENST00000526117 SLC22A18ASQ8N1D0 253 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 LPCAT1Q8NF37 534 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 OR13H1Q8NG92 308 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 RMDN1Q96DB5 314 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 DTD2Q96FN9 168 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 OXNAD1Q96HP4 312 aaPredicted RBP17.29■□□□□ 0.36
LMX1B-203ENST00000526117 PBKQ96KB5 322 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 FAM118BQ9BPY3 351 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 MAGEE1Q9HCI5 957 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 HOMER3Q9NSC5 361 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 RSPH14Q9UHP6 348 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 PYCARDQ9ULZ3 195 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 AAR2Q9Y312 384 aaKnown RBP17.29■□□□□ 0.36
LMX1B-203ENST00000526117 ADAMTS9Q9P2N4 1935 aa17.29■□□□□ 0.36
LMX1B-203ENST00000526117 DOCK9Q9BZ29 2069 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 CEP250Q9BV73 2442 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 SPTY2D1-AS1A0A0U1RR47 76 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 RGSL1A5PLK6 1076 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 ITGAVP06756 1048 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 ALPIP09923 528 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 HLA-DPA1P20036 260 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 TRIM23P36406 574 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 ARRB1P49407 418 aaPredicted RBP17.28■□□□□ 0.36
LMX1B-203ENST00000526117 STC1P52823 247 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 GEMP55040 296 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 WNT3AP56704 352 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 CLDN2P57739 230 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 PTSQ03393 145 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 PTK2BQ14289 1009 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 IRF4Q15306 451 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 P3H1Q32P28 736 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 LRRC66Q68CR7 880 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 Q6ZSR6 202 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 TECPR1Q7Z6L1 1165 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 PIP4P1Q86T03 277 aa17.28■□□□□ 0.36
LMX1B-203ENST00000526117 NRSN1Q8IZ57 195 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms