RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 A8MX80 341 aa24.04■■□□□ 1.44
USP47-205ENST00000525257 PALMO75781 387 aa24.04■■□□□ 1.44
USP47-205ENST00000525257 CSNK1DP48730 415 aa24.04■■□□□ 1.44
USP47-205ENST00000525257 OGDHQ02218 1023 aa24.04■■□□□ 1.44
USP47-205ENST00000525257 BCL2L1Q07817 233 aa24.04■■□□□ 1.44
USP47-205ENST00000525257 MAP9Q49MG5 647 aa24.04■■□□□ 1.44
USP47-205ENST00000525257 PPP1R15BQ5SWA1 713 aa24.04■■□□□ 1.44
USP47-205ENST00000525257 DCUN1D2Q6PH85 259 aa24.04■■□□□ 1.44
USP47-205ENST00000525257 SLITRK4Q8IW52 837 aa24.04■■□□□ 1.44
USP47-205ENST00000525257 NEK11Q8NG66 645 aa24.04■■□□□ 1.44
USP47-205ENST00000525257 ENOX1Q8TC92 643 aaKnown RBP24.04■■□□□ 1.44
USP47-205ENST00000525257 TMEM159Q96B96 161 aa24.04■■□□□ 1.44
USP47-205ENST00000525257 CMKLR1Q99788 373 aa24.04■■□□□ 1.44
USP47-205ENST00000525257 CINPQ9BW66 212 aaPredicted RBP24.04■■□□□ 1.44
USP47-205ENST00000525257 LGR4Q9BXB1 951 aa24.04■■□□□ 1.44
USP47-205ENST00000525257 SEMA6CQ9H3T2 930 aa24.04■■□□□ 1.44
USP47-205ENST00000525257 WDR26Q9H7D7 661 aa24.04■■□□□ 1.44
USP47-205ENST00000525257 DONSONQ9NYP3 566 aa24.04■■□□□ 1.44
USP47-205ENST00000525257 AP4E1Q9UPM8 1137 aa24.04■■□□□ 1.44
USP47-205ENST00000525257 ARHGEF17Q96PE2 2063 aaPredicted RBP24.03■■□□□ 1.44
USP47-205ENST00000525257 EEF2KO00418 725 aaKnown RBP24.03■■□□□ 1.44
USP47-205ENST00000525257 ITGB2P05107 769 aa24.03■■□□□ 1.44
USP47-205ENST00000525257 GM2AP17900 193 aa24.03■■□□□ 1.44
USP47-205ENST00000525257 HTR7P34969 479 aa24.03■■□□□ 1.44
USP47-205ENST00000525257 NFKB2Q00653 900 aa24.03■■□□□ 1.44
USP47-205ENST00000525257 DPPA4Q7L190 304 aa24.03■■□□□ 1.44
USP47-205ENST00000525257 PELI3Q8N2H9 469 aa24.03■■□□□ 1.44
USP47-205ENST00000525257 ECHDC3Q96DC8 303 aa24.03■■□□□ 1.44
USP47-205ENST00000525257 AGPAT1Q99943 283 aa24.03■■□□□ 1.44
USP47-205ENST00000525257 DHX35Q9H5Z1 703 aaKnown RBP24.03■■□□□ 1.44
USP47-205ENST00000525257 SUDS3Q9H7L9 328 aaPredicted RBP24.03■■□□□ 1.44
USP47-205ENST00000525257 SP110Q9HB58 689 aa24.03■■□□□ 1.44
USP47-205ENST00000525257 PCDHGA4Q9Y5G9 962 aa24.03■■□□□ 1.44
USP47-205ENST00000525257 NAV2Q8IVL1 2488 aa24.03■■□□□ 1.44
USP47-205ENST00000525257 UBR5O95071 2799 aaPredicted RBP24.02■■□□□ 1.44
USP47-205ENST00000525257 C9orf172C9J069 976 aa24.02■■□□□ 1.44
USP47-205ENST00000525257 TNFRSF10CO14798 259 aa24.02■■□□□ 1.44
USP47-205ENST00000525257 ARHGAP6O43182 974 aa24.02■■□□□ 1.44
USP47-205ENST00000525257 TEX33O43247 280 aa24.02■■□□□ 1.44
USP47-205ENST00000525257 NUDT21O43809 227 aaKnown RBP24.02■■□□□ 1.44
USP47-205ENST00000525257 FAM87AP0C7U9 286 aa24.02■■□□□ 1.44
USP47-205ENST00000525257 DESP17661 470 aa24.02■■□□□ 1.44
USP47-205ENST00000525257 TRIM23P36406 574 aa24.02■■□□□ 1.44
USP47-205ENST00000525257 C16orf72Q14CZ0 275 aa24.02■■□□□ 1.44
USP47-205ENST00000525257 ACOX1Q15067 660 aa24.02■■□□□ 1.44
USP47-205ENST00000525257 CA9Q16790 459 aa24.02■■□□□ 1.44
USP47-205ENST00000525257 AFMIDQ63HM1 303 aa24.02■■□□□ 1.44
USP47-205ENST00000525257 RDH14Q9HBH5 336 aa24.02■■□□□ 1.44
USP47-205ENST00000525257 PCDHB11Q9Y5F2 797 aa24.02■■□□□ 1.44
USP47-205ENST00000525257 PRSS38A1L453 326 aa24.01■■□□□ 1.43
USP47-205ENST00000525257 DFFAO00273 331 aa24.01■■□□□ 1.43
USP47-205ENST00000525257 HOXC4P09017 264 aaPredicted RBP24.01■■□□□ 1.43
USP47-205ENST00000525257 WT1P19544 449 aaPredicted RBP24.01■■□□□ 1.43
USP47-205ENST00000525257 COPB1P53618 953 aaKnown RBP24.01■■□□□ 1.43
USP47-205ENST00000525257 MAZP56270 477 aaKnown RBP24.01■■□□□ 1.43
USP47-205ENST00000525257 AMZ1Q400G9 498 aa24.01■■□□□ 1.43
USP47-205ENST00000525257 PNCKQ6P2M8 343 aa24.01■■□□□ 1.43
USP47-205ENST00000525257 XKR5Q6UX68 686 aa24.01■■□□□ 1.43
USP47-205ENST00000525257 ARHGAP36Q6ZRI8 547 aa24.01■■□□□ 1.43
USP47-205ENST00000525257 ZSCAN1Q8NBB4 408 aa24.01■■□□□ 1.43
USP47-205ENST00000525257 KIAA1524Q8TCG1 905 aa24.01■■□□□ 1.43
USP47-205ENST00000525257 NSMCE3Q96MG7 304 aa24.01■■□□□ 1.43
USP47-205ENST00000525257 STARD5Q9NSY2 213 aa24.01■■□□□ 1.43
USP47-205ENST00000525257 FANCLQ9NW38 375 aa24.01■■□□□ 1.43
USP47-205ENST00000525257 DAPK3O43293 454 aa24■■□□□ 1.43
USP47-205ENST00000525257 CSRP3P50461 194 aa24■■□□□ 1.43
USP47-205ENST00000525257 SCNN1BP51168 640 aa24■■□□□ 1.43
USP47-205ENST00000525257 POLR2LP62875 67 aaKnown RBP24■■□□□ 1.43
USP47-205ENST00000525257 CYP4F2P78329 520 aa24■■□□□ 1.43
USP47-205ENST00000525257 B4GALNT1Q00973 533 aa24■■□□□ 1.43
USP47-205ENST00000525257 ARHGAP12Q8IWW6 846 aa24■■□□□ 1.43
USP47-205ENST00000525257 MCOLN2Q8IZK6 566 aa24■■□□□ 1.43
USP47-205ENST00000525257 KCTD15Q96SI1 283 aaPredicted RBP24■■□□□ 1.43
USP47-205ENST00000525257 CARS2Q9HA77 564 aaKnown RBP24■■□□□ 1.43
USP47-205ENST00000525257 SPATS2LQ9NUQ6 558 aaKnown RBP24■■□□□ 1.43
USP47-205ENST00000525257 A0A1W2PQC6 194 aa23.99■■□□□ 1.43
USP47-205ENST00000525257 TRAFD1O14545 582 aaPredicted RBP23.99■■□□□ 1.43
USP47-205ENST00000525257 B4GAT1O43505 415 aa23.99■■□□□ 1.43
USP47-205ENST00000525257 CPNE6O95741 557 aa23.99■■□□□ 1.43
USP47-205ENST00000525257 ITGB6P18564 788 aa23.99■■□□□ 1.43
USP47-205ENST00000525257 PSMA2P25787 234 aa23.99■■□□□ 1.43
USP47-205ENST00000525257 OR1D5P58170 312 aa23.99■■□□□ 1.43
USP47-205ENST00000525257 TBR1Q16650 682 aa23.99■■□□□ 1.43
USP47-205ENST00000525257 TSR1Q2NL82 804 aaKnown RBP23.99■■□□□ 1.43
USP47-205ENST00000525257 ACAD10Q6JQN1 1059 aa23.99■■□□□ 1.43
USP47-205ENST00000525257 RFX8Q6ZV50 586 aa23.99■■□□□ 1.43
USP47-205ENST00000525257 PIM3Q86V86 326 aa23.99■■□□□ 1.43
USP47-205ENST00000525257 DTX1Q86Y01 620 aa23.99■■□□□ 1.43
USP47-205ENST00000525257 NPWQ8N729 165 aa23.99■■□□□ 1.43
USP47-205ENST00000525257 JPH3Q8WXH2 748 aaPredicted RBP23.99■■□□□ 1.43
USP47-205ENST00000525257 NUS1Q96E22 293 aa23.99■■□□□ 1.43
USP47-205ENST00000525257 PEBP4Q96S96 227 aa23.99■■□□□ 1.43
USP47-205ENST00000525257 SNRNP25Q9BV90 132 aaKnown RBP23.99■■□□□ 1.43
USP47-205ENST00000525257 B4GALT6Q9UBX8 382 aa23.99■■□□□ 1.43
USP47-205ENST00000525257 IL17BQ9UHF5 180 aa23.99■■□□□ 1.43
USP47-205ENST00000525257 PCSK1NQ9UHG2 260 aa23.99■■□□□ 1.43
USP47-205ENST00000525257 TTC24A2A3L6 582 aaPredicted RBP23.98■■□□□ 1.43
USP47-205ENST00000525257 PDE2AO00408 941 aaPredicted RBP23.98■■□□□ 1.43
USP47-205ENST00000525257 MYCLP1P12525 358 aaPredicted RBP23.98■■□□□ 1.43
USP47-205ENST00000525257 CCL4P13236 92 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms