RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 WNT3AP56704 352 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 CLDN2P57739 230 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 HNRNPKP61978 463 aaKnown RBP eCLIP5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 IL9RQ01113 521 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 SEMG2Q02383 582 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 CDK18Q07002 472 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 ADCY2Q08462 1091 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 NIPAL4Q0D2K0 466 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 WASHC5Q12768 1159 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 RALGDSQ12967 914 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 KLF1Q13351 362 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 PDE1CQ14123 709 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 FGL2Q14314 439 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 GALNT3Q14435 633 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 AGERQ15109 404 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 IRF4Q15306 451 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 CNGA3Q16281 694 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 LONRF2Q1L5Z9 754 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 ZNF423Q2M1K9 1284 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 ANKRD20A2Q5SQ80 823 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 ANKRD20A1Q5TYW2 823 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 ANKRD20A3Q5VUR7 823 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 LRRC66Q68CR7 880 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 RAET1GQ6H3X3 334 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 AADACL2Q6P093 401 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 LIPIQ6XZB0 460 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 MACC1Q6ZN28 852 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 GCNT7Q6ZNI0 430 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 GSTA5Q7RTV2 222 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 KDELC2Q7Z4H8 507 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 ABI3BPQ7Z7G0 1075 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 PARGQ86W56 976 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 ZSWIM9Q86XI8 627 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 SLC13A5Q86YT5 568 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 NAXDQ8IW45 347 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 RAVER1Q8IY67 606 aaKnown RBP5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 NRSN1Q8IZ57 195 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 ZNF567Q8N184 647 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 CNTD1Q8N815 330 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 FAM71DQ8N9W8 422 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 OR2I1PQ8NGU4 316 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 BTN2A2Q8WVV5 523 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 PIH1D2Q8WWB5 315 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 DTD2Q96FN9 168 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 PBKQ96KB5 322 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 SPATA13Q96N96 652 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 FCRL5Q96RD9 977 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 MCCC1Q96RQ3 725 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 CDC6Q99741 560 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 FAM118BQ9BPY3 351 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 ORAI3Q9BRQ5 295 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 GPR63Q9BZJ6 419 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 SLC13A1Q9BZW2 595 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 CDH19Q9H159 772 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 KCNF1Q9H3M0 494 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 TRABDQ9H4I3 376 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 WDR26Q9H7D7 661 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 EBF2Q9HAK2 575 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 PHPT1Q9NRX4 125 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 RXFP3Q9NSD7 469 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 DNAJC28Q9NX36 388 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 UBP1Q9NZI7 540 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 PKD2L2Q9NZM6 624 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 HACD3Q9P035 362 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 CA5BQ9Y2D0 317 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 FNDC3AQ9Y2H6 1198 aaKnown RBP5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 COQ6Q9Y2Z9 468 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 SLCO1B1Q9Y6L6 691 aa5.41□□□□□ -1.54
HMGB1P40-201ENST00000525121 EML5Q05BV3 1969 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 THADAQ6YHU6 1953 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 MYO18AQ92614 2054 aaKnown RBP5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 SPTY2D1-AS1A0A0U1RR47 76 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 A0A1B0GTQ1 180 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 RGSL1A5PLK6 1076 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 POM121BA6NF01 834 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 C5orf60A6NFR6 353 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 GOLGA8CPA6NN73 597 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 ANKRD66B4E2M5 251 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 C10orf142B7Z368 130 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 PGRMC1O00264 195 aaKnown RBP5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 ENC1O14682 589 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 RAD51BO15315 384 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 LIASO43766 372 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 PCDHGA12O60330 932 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 FZD6O60353 706 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 RASGRP1O95267 797 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 MT-CYBP00156 380 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 IFNB1P01574 187 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 EPOP01588 193 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 WNT1P04628 370 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 FGF1P05230 155 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 MMP2P08253 660 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 PDHA1P08559 390 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 CEACAM1P13688 526 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 CTSEP14091 401 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 TCP1P17987 556 aaKnown RBP5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 CSRP1P21291 193 aaKnown RBP5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 LHCGRP22888 699 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 PSMB4P28070 264 aa5.4□□□□□ -1.54
HMGB1P40-201ENST00000525121 EPHA8P29322 1005 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms