RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 PFKPQ01813 784 aa13.81□□□□□ -0.2
LDLRAD3-202ENST00000524419 FAM45BPQ6NSW5 357 aa13.81□□□□□ -0.2
LDLRAD3-202ENST00000524419 MRNIPQ6NTE8 343 aa13.81□□□□□ -0.2
LDLRAD3-202ENST00000524419 RNF135Q8IUD6 432 aa13.81□□□□□ -0.2
LDLRAD3-202ENST00000524419 KBTBD2Q8IY47 623 aa13.81□□□□□ -0.2
LDLRAD3-202ENST00000524419 LSMEM2Q8N112 164 aa13.81□□□□□ -0.2
LDLRAD3-202ENST00000524419 ZNF461Q8TAF7 563 aa13.81□□□□□ -0.2
LDLRAD3-202ENST00000524419 FAM45AQ8TCE6 357 aa13.81□□□□□ -0.2
LDLRAD3-202ENST00000524419 BRSK1Q8TDC3 778 aa13.81□□□□□ -0.2
LDLRAD3-202ENST00000524419 MOCOSQ96EN8 888 aa13.81□□□□□ -0.2
LDLRAD3-202ENST00000524419 MYRFLQ96LU7 910 aa13.81□□□□□ -0.2
LDLRAD3-202ENST00000524419 PSKH2Q96QS6 385 aa13.81□□□□□ -0.2
LDLRAD3-202ENST00000524419 OR52B2Q96RD2 323 aa13.81□□□□□ -0.2
LDLRAD3-202ENST00000524419 NR1H4Q96RI1 486 aaPredicted RBP13.81□□□□□ -0.2
LDLRAD3-202ENST00000524419 DDX50Q9BQ39 737 aaKnown RBP13.81□□□□□ -0.2
LDLRAD3-202ENST00000524419 MARCH4Q9P2E8 410 aaPredicted RBP13.81□□□□□ -0.2
LDLRAD3-202ENST00000524419 SCOCQ9UIL1 159 aa13.81□□□□□ -0.2
LDLRAD3-202ENST00000524419 CDYLQ9Y232 598 aa13.81□□□□□ -0.2
LDLRAD3-202ENST00000524419 COL4A6Q14031 1691 aa13.81□□□□□ -0.2
LDLRAD3-202ENST00000524419 A0A1B0GVM2 712 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 MAGEA13PA6NCF6 341 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 TCAF2A6NFQ2 919 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 EIF4E1BA6NMX2 242 aaKnown RBP13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 NEMP1O14524 444 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 CD3EAPO15446 510 aaKnown RBP13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 ABLIM3O94929 683 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 GOT2P00505 430 aaKnown RBP13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 HOXB8P17481 243 aaPredicted RBP13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 TFEBP19484 476 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 GLDCP23378 1020 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 DSG1Q02413 1049 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 CNKSR3Q6P9H4 555 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 SLC39A5Q6ZMH5 540 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 TRIM67Q6ZTA4 783 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 SETD3Q86TU7 594 aaPredicted RBP13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 LDB1Q86U70 411 aaPredicted RBP13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 PHTF2Q8N3S3 785 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 OR52K2Q8NGK3 314 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 GPR150Q8NGU9 434 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 TRMT2BQ96GJ1 504 aaKnown RBP13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 TBATAQ96M53 351 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 TRIB3Q96RU7 358 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 RTKNQ9BST9 563 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 HERC2P3Q9BVR0 1158 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 SCUBE2Q9NQ36 999 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 ZDHHC2Q9UIJ5 367 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 CDH22Q9UJ99 828 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 ARHGAP26Q9UNA1 814 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 GOLGA8QA0A0J9YX86 632 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 CCDC162PA2VCL2 907 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 GOLGA8OA6NCC3 632 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 GOLGA8NF8WBI6 632 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 GRID2O43424 1007 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 ZBTB14O43829 449 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 CRTAMO95727 393 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 BAG2O95816 211 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 KLKB1P03952 638 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 COX4I1P13073 169 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 ITGAXP20702 1163 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 OGNP20774 298 aaKnown RBP13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 SP100P23497 879 aaPredicted RBP13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 SLC26A3P40879 764 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 SGSHP51688 502 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 CDKN2DP55273 166 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 KLF10Q13118 480 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 ACAP2Q15057 778 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 RALGPS1Q5JS13 557 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 ADGRF1Q5T601 910 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 UCMAQ8WVF2 138 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 GATA6Q92908 595 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 CNDP1Q96KN2 507 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 ZNF558Q96NG5 402 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 TTC1Q99614 292 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 ECSITQ9BQ95 431 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 CCDC28BQ9BUN5 200 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 NUF2Q9BZD4 464 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 SHCBP1LQ9BZQ2 653 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 RNF208Q9H0X6 261 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 SUDS3Q9H7L9 328 aaPredicted RBP13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 GKN1Q9NS71 199 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 CATSPERZQ9NTU4 200 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 AGO1Q9UL18 857 aaKnown RBP13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 PPM1HQ9ULR3 514 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 ACTL7AQ9Y615 435 aa13.8□□□□□ -0.2
LDLRAD3-202ENST00000524419 LTBP2Q14767 1821 aa13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 INSIG1O15503 277 aa13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 BUD23O43709 281 aaKnown RBP13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 TSPAN3O60637 253 aa13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 SLC4A1P02730 911 aa13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 PIRTP0C851 137 aa13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 CCL5P13501 91 aa13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 CES1P23141 567 aa13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 PPP3CCP48454 512 aa13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 TLE2Q04725 743 aa13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 NSUN2Q08J23 767 aaKnown RBP eCLIP13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 CUL3Q13618 768 aa13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 TRIM60Q495X7 471 aa13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 SDCCAG8Q86SQ7 713 aaPredicted RBP13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 SLC22A9Q8IVM8 553 aa13.79□□□□□ -0.2
LDLRAD3-202ENST00000524419 HERC6Q8IVU3 1022 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms