RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 ELP6Q0PNE2 266 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 MON1BQ7L1V2 547 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 ZDHHC13Q8IUH4 622 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 BEND7Q8N7W2 519 aaPredicted RBP16.24■□□□□ 0.19
USP42-207ENST00000521713 ARNTL2Q8WYA1 636 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 PLD4Q96BZ4 506 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 BBS4Q96RK4 519 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 FBXO6Q9NRD1 293 aaPredicted RBP16.24■□□□□ 0.19
USP42-207ENST00000521713 COQ4Q9Y3A0 265 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 A0A0U1RQF3 1178 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 PMM2O15305 246 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 KRT36O76013 467 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 CCDC166P0CW27 439 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 CDH4P55283 916 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 ATP6V0D1P61421 351 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 SLC5A9Q2M3M2 681 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 ZCCHC8Q6NZY4 707 aaKnown RBP16.24■□□□□ 0.19
USP42-207ENST00000521713 OR7A2PQ8NGA2 310 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 PLK2Q9NYY3 685 aa16.24■□□□□ 0.19
USP42-207ENST00000521713 AHDC1Q5TGY3 1603 aaPredicted RBP16.24■□□□□ 0.19
USP42-207ENST00000521713 RCCD1A6NED2 376 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 E9PAM4 449 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 DHX15O43143 795 aaKnown RBP16.23■□□□□ 0.19
USP42-207ENST00000521713 F2P00734 622 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 ACRP10323 421 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 MAPKAPK2P49137 400 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 IQCKQ8N0W5 287 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 SLC9A7Q96T83 725 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 MAGEH1Q9H213 219 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 TMPRSS4Q9NRS4 437 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 ZNHIT2Q9UHR6 403 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 PRPF19Q9UMS4 504 aaKnown RBP16.23■□□□□ 0.19
USP42-207ENST00000521713 GPSM3Q9Y4H4 160 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 INPP4BO15327 924 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 IDH3BO43837 385 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 ENTPD5O75356 428 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 PRNPP04156 253 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 ATP5F1P24539 256 aaPredicted RBP16.23■□□□□ 0.19
USP42-207ENST00000521713 ADSSP30520 456 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 RFC2P35250 354 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 FRG1Q14331 258 aaKnown RBP16.23■□□□□ 0.19
USP42-207ENST00000521713 RIPOR1Q6ZS17 1223 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 CAPSLQ8WWF8 208 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 KLHL5Q96PQ7 755 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 ATG7O95352 703 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 SLC35G4P0C7Q5 338 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 PLK1P53350 603 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 FAM228AQ86W67 206 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 OR4L1Q8NH43 312 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 ERLEC1Q96DZ1 483 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 TEPSINQ96N21 525 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 TMEM175Q9BSA9 504 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 HECAQ9UBI9 543 aaPredicted RBP16.23■□□□□ 0.19
USP42-207ENST00000521713 SNX6Q9UNH7 406 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 LINC00854A0A1B0GVQ3 168 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 C5orf60A6NFR6 353 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 TPP1O14773 563 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 SGTAO43765 313 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 UQCRBP14927 111 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 HPCAL1P37235 193 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 DAOAP59103 153 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 CRADDP78560 199 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 PPP2R2DQ66LE6 453 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 MZT2BQ6NZ67 158 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 LEMD2Q8NC56 503 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 MCCC1Q96RQ3 725 aaPredicted RBP16.23■□□□□ 0.19
USP42-207ENST00000521713 SERHL2Q9H4I8 314 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 ALG9Q9H6U8 611 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 BPIFA1Q9NP55 256 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 SERHLQ9NQF3 203 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 SLC27A6Q9Y2P4 619 aa16.23■□□□□ 0.19
USP42-207ENST00000521713 DCXO43602 365 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 LRCH4O75427 683 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 TSPAN9O75954 239 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 SLC25A14O95258 325 aaPredicted RBP16.22■□□□□ 0.19
USP42-207ENST00000521713 PFKMP08237 780 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 CTPS1P17812 591 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 GUCA1AP43080 201 aaPredicted RBP16.22■□□□□ 0.19
USP42-207ENST00000521713 COX10Q12887 443 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 FAM126BQ8IXS8 530 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 POU5F2Q8N7G0 328 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 RTL3Q8N8U3 475 aaKnown RBP16.22■□□□□ 0.19
USP42-207ENST00000521713 SPATA2Q9UM82 520 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 ENTPD4Q9Y227 616 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 TBC1D3DA0A087WVF3 549 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 TBC1D3IA0A087WXS9 549 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 TBC1D3EA0A087X179 549 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 TBC1D3KA0A087X1G2 549 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 TBC1D3FA6NER0 549 aaPredicted RBP16.22■□□□□ 0.19
USP42-207ENST00000521713 TBC1D3LB9A6J9 549 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 ANXA6P08133 673 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 TBC1D3HP0C7X1 549 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 TLX1P31314 330 aaPredicted RBP16.22■□□□□ 0.19
USP42-207ENST00000521713 GJA9P57773 515 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 MRPS22P82650 360 aaKnown RBP16.22■□□□□ 0.19
USP42-207ENST00000521713 TSNQ15631 228 aaKnown RBP16.22■□□□□ 0.19
USP42-207ENST00000521713 TBC1D3GQ6DHY5 549 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 TBC1D3CQ6IPX1 549 aa16.22■□□□□ 0.19
USP42-207ENST00000521713 GDF6Q6KF10 455 aaPredicted RBP16.22■□□□□ 0.19
USP42-207ENST00000521713 FGD2Q7Z6J4 655 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms