RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 TRIM10Q9UDY6 481 aa9.49□□□□□ -0.89
CLK4-209ENST00000521621 GGT7Q9UJ14 662 aa9.49□□□□□ -0.89
CLK4-209ENST00000521621 PCDHGA1Q9Y5H4 931 aa9.49□□□□□ -0.89
CLK4-209ENST00000521621 ANKRD66B4E2M5 251 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 H0Y8X5 98 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 RAD51BO15315 384 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 PSMD3O43242 534 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 STIP1P31948 543 aaKnown RBP9.48□□□□□ -0.89
CLK4-209ENST00000521621 CD68P34810 354 aaPredicted RBP9.48□□□□□ -0.89
CLK4-209ENST00000521621 DSC2Q02487 901 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 FZD2Q14332 565 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 CCDC6Q16204 474 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 LVRNQ6Q4G3 990 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 DGLUCYQ7Z3D6 616 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 ADAT2Q7Z6V5 191 aaKnown RBP9.48□□□□□ -0.89
CLK4-209ENST00000521621 PARGQ86W56 976 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 SLC22A18ASQ8N1D0 253 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 ARNT2Q9HBZ2 717 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 HOMER3Q9NSC5 361 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 B4GALT6Q9UBX8 382 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 FAM153AQ9UHL3 310 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 FNDC3AQ9Y2H6 1198 aaKnown RBP9.48□□□□□ -0.89
CLK4-209ENST00000521621 PCDHB9Q9Y5E1 797 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 PCDHGC4Q9Y5F7 938 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 H3BM21 787 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 PDE2AO00408 941 aaPredicted RBP9.48□□□□□ -0.89
CLK4-209ENST00000521621 NEMP1O14524 444 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 MMP20O60882 483 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 ANXA9O76027 345 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 STK10O94804 968 aaKnown RBP9.48□□□□□ -0.89
CLK4-209ENST00000521621 NDST3O95803 873 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 ELFN1P0C7U0 828 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 HLA-DPA1P20036 260 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 KELP23276 732 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 NUMBP49757 651 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 OTUD4Q01804 1114 aaKnown RBP9.48□□□□□ -0.89
CLK4-209ENST00000521621 NFATC4Q14934 902 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 IRF4Q15306 451 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 QPCTQ16769 361 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 WSCD2Q2TBF2 565 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 POM121L1PQ3SYA9 428 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 Q6ZSR6 202 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 OR13H1Q8NG92 308 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 ACTL9Q8TC94 416 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 HERPUD2Q9BSE4 406 aa9.48□□□□□ -0.89
CLK4-209ENST00000521621 DRG1Q9Y295 367 aaKnown RBP9.48□□□□□ -0.89
CLK4-209ENST00000521621 AAR2Q9Y312 384 aaKnown RBP9.48□□□□□ -0.89
CLK4-209ENST00000521621 FAM47DPA6NHR8 397 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 GPR89AB7ZAQ6 455 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 PAK4O96013 591 aaPredicted RBP9.47□□□□□ -0.89
CLK4-209ENST00000521621 GPR89BP0CG08 455 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 HNF1BP35680 557 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 BLKP51451 505 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 MAXP61244 160 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 HNRNPKP61978 463 aaKnown RBP eCLIP9.47□□□□□ -0.89
CLK4-209ENST00000521621 CDK18Q07002 472 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 RPS6KA1Q15418 735 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 P3H1Q32P28 736 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 SEL1L2Q5TEA6 688 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 PNCKQ6P2M8 343 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 CRTC1Q6UUV9 634 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 TMC3Q7Z5M5 1100 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 ZNF567Q8N184 647 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 RASGEF1CQ8N431 466 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 FSTL5Q8N475 847 aaPredicted RBP9.47□□□□□ -0.89
CLK4-209ENST00000521621 NETO2Q8NC67 525 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 SPATA13Q96N96 652 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 NLGN3Q9NZ94 848 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 ITM2BQ9Y287 266 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 JRKLQ9Y4A0 524 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 A0A0U1RQJ8 604 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 NPIPB15A6NHN6 443 aaPredicted RBP9.47□□□□□ -0.89
CLK4-209ENST00000521621 ERI2A8K979 691 aaKnown RBP9.47□□□□□ -0.89
CLK4-209ENST00000521621 KCNK1O00180 336 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 PPFIA2O75334 1257 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 NEBLO76041 1014 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 LHCGRP22888 699 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 ADRA1AP35348 466 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 GEMP55040 296 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 EIF3EP60228 445 aaKnown RBP9.47□□□□□ -0.89
CLK4-209ENST00000521621 PTSQ03393 145 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 ZNF211Q13398 564 aaPredicted RBP9.47□□□□□ -0.89
CLK4-209ENST00000521621 SLC13A5Q86YT5 568 aaPredicted RBP9.47□□□□□ -0.89
CLK4-209ENST00000521621 REXO1L1PQ8IX06 675 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 NUS1Q96E22 293 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 PBKQ96KB5 322 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 APOOQ9BUR5 198 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 MLPHQ9BV36 600 aaPredicted RBP9.47□□□□□ -0.89
CLK4-209ENST00000521621 DUSP23Q9BVJ7 150 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 GUCA1BQ9UMX6 200 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 CACNA1EQ15878 2313 aa9.47□□□□□ -0.89
CLK4-209ENST00000521621 SLC31A1O15431 190 aa9.46□□□□□ -0.89
CLK4-209ENST00000521621 TNFSF14O43557 240 aa9.46□□□□□ -0.89
CLK4-209ENST00000521621 PIAS2O75928 621 aa9.46□□□□□ -0.89
CLK4-209ENST00000521621 RECQL5O94762 991 aaPredicted RBP9.46□□□□□ -0.89
CLK4-209ENST00000521621 FGF1P05230 155 aa9.46□□□□□ -0.89
CLK4-209ENST00000521621 ITGAVP06756 1048 aa9.46□□□□□ -0.89
CLK4-209ENST00000521621 ADRB1P08588 477 aa9.46□□□□□ -0.89
CLK4-209ENST00000521621 MYCLP1P12525 358 aaPredicted RBP9.46□□□□□ -0.89
CLK4-209ENST00000521621 PRLRP16471 622 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms