RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 KLF18A0A0U1RQI7 1052 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 ERICH2A1L162 156 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 TCP10L2B9ZVM9 353 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 SH2B2O14492 632 aaPredicted RBP4.33□□□□□ -1.72
CLK4-207ENST00000520909 LARGE1O95461 756 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 CYP3A4P08684 503 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 NAGAP17050 411 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 GNLYP22749 145 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 CYP3A7P24462 503 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 PDIA3P30101 505 aaKnown RBP4.33□□□□□ -1.72
CLK4-207ENST00000520909 PIK3CBP42338 1070 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 MMP14P50281 582 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 TMPRSS3P57727 454 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 TFAP4Q01664 338 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 CUL4AQ13619 759 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 RBM39Q14498 530 aaKnown RBP4.33□□□□□ -1.72
CLK4-207ENST00000520909 ME3Q16798 604 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 TMEM71Q6P5X7 295 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 SYNE3Q6ZMZ3 975 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 IQCA1Q86XH1 822 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 PALB2Q86YC2 1186 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 CCDC83Q8IWF9 413 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 ZNF444Q8N0Y2 327 aaPredicted RBP4.33□□□□□ -1.72
CLK4-207ENST00000520909 RNF152Q8N8N0 203 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 UBAC1Q9BSL1 405 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 IDI2Q9BXS1 227 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 KLHL31Q9H511 634 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 VEZTQ9HBM0 779 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 MYOZ2Q9NPC6 264 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 RGL1Q9NZL6 768 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 CA14Q9ULX7 337 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 SMC3Q9UQE7 1217 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 MAN2B2Q9Y2E5 1009 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.33□□□□□ -1.72
CLK4-207ENST00000520909 RAP2CQ9Y3L5 183 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 SCN9AQ15858 1988 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 MYH2Q9UKX2 1941 aa4.33□□□□□ -1.72
CLK4-207ENST00000520909 LOC105369274A0A096LPK9 316 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 LOC102723532A0A0G2JNH3 316 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 DDTLA6NHG4 134 aaPredicted RBP4.32□□□□□ -1.72
CLK4-207ENST00000520909 CCDC69A6NI79 296 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 TSPY2A6NKD2 308 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 M0QYT0 321 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 ZBTB43O43298 467 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 PFKFB2O60825 505 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 ENTPD3O75355 529 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 CER1O95813 267 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 TSPY3P0CV98 308 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 TSPY8P0CW00 308 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 GRK5P34947 590 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 FOXL2P58012 376 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 RPL15P61313 204 aaKnown RBP4.32□□□□□ -1.72
CLK4-207ENST00000520909 WTAPQ15007 396 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 GFOD2Q3B7J2 385 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 FKBP1CQ5VVH2 108 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 HEPHL1Q6MZM0 1159 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 ADAM5Q6NVV9 412 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 OR4N4Q8N0Y3 316 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 GPC2Q8N158 579 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 TMTC2Q8N394 836 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 FBXL16Q8N461 479 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 GLIS1Q8NBF1 620 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 SLC35F5Q8WV83 523 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 FAM151AQ8WW52 585 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 MCRS1Q96EZ8 462 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 ZNF274Q96GC6 653 aaPredicted RBP4.32□□□□□ -1.72
CLK4-207ENST00000520909 ZBED3Q96IU2 234 aaPredicted RBP4.32□□□□□ -1.72
CLK4-207ENST00000520909 COLEC11Q9BWP8 271 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 AGXT2Q9BYV1 514 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 ACTR5Q9H9F9 607 aaPredicted RBP4.32□□□□□ -1.72
CLK4-207ENST00000520909 LY9Q9HBG7 655 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 CHMP5Q9NZZ3 219 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 FER1L6Q2WGJ9 1857 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 CCDC88AQ3V6T2 1871 aa4.32□□□□□ -1.72
CLK4-207ENST00000520909 MAST2Q6P0Q8 1798 aa4.31□□□□□ -1.72
CLK4-207ENST00000520909 BRCA1P38398 1863 aaKnown RBP4.31□□□□□ -1.72
CLK4-207ENST00000520909 A0A1W2PPC4 97 aa4.31□□□□□ -1.72
CLK4-207ENST00000520909 MPHOSPH10O00566 681 aaKnown RBP4.31□□□□□ -1.72
CLK4-207ENST00000520909 APOL1O14791 398 aa4.31□□□□□ -1.72
CLK4-207ENST00000520909 CPLX1O14810 134 aa4.31□□□□□ -1.72
CLK4-207ENST00000520909 KPNA5O15131 536 aa4.31□□□□□ -1.72
CLK4-207ENST00000520909 DHX16O60231 1041 aaKnown RBP4.31□□□□□ -1.72
CLK4-207ENST00000520909 NMT2O60551 498 aa4.31□□□□□ -1.72
CLK4-207ENST00000520909 JAK2O60674 1132 aa4.31□□□□□ -1.72
CLK4-207ENST00000520909 PQBP1O60828 265 aaKnown RBP4.31□□□□□ -1.72
CLK4-207ENST00000520909 PEPDP12955 493 aa4.31□□□□□ -1.72
CLK4-207ENST00000520909 AKR1B1P15121 316 aa4.31□□□□□ -1.72
CLK4-207ENST00000520909 RXRAP19793 462 aa4.31□□□□□ -1.72
CLK4-207ENST00000520909 GJB2P29033 226 aa4.31□□□□□ -1.72
CLK4-207ENST00000520909 SHMT1P34896 483 aa4.31□□□□□ -1.72
CLK4-207ENST00000520909 EPS15P42566 896 aa4.31□□□□□ -1.72
CLK4-207ENST00000520909 LIFRP42702 1097 aa4.31□□□□□ -1.72
CLK4-207ENST00000520909 PPP3CCP48454 512 aa4.31□□□□□ -1.72
CLK4-207ENST00000520909 NT5C2P49902 561 aa4.31□□□□□ -1.72
CLK4-207ENST00000520909 METAP2P50579 478 aaKnown RBP eCLIP4.31□□□□□ -1.72
CLK4-207ENST00000520909 EVCP57679 992 aa4.31□□□□□ -1.72
CLK4-207ENST00000520909 GABPAQ06546 454 aa4.31□□□□□ -1.72
CLK4-207ENST00000520909 ST3GAL1Q11201 340 aa4.31□□□□□ -1.72
CLK4-207ENST00000520909 SF3B4Q15427 424 aaKnown RBP eCLIP4.31□□□□□ -1.721e-9■■■■□ 25.2
CLK4-207ENST00000520909 LCE1FQ5T754 118 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms