RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 MYBL2P10244 700 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 ITIH2P19823 946 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 CA4P22748 312 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 CDK16Q00536 496 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 SEMG2Q02383 582 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 MTM1Q13496 603 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 QPCTQ16769 361 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 UGP2Q16851 508 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 ARMC12Q5T9G4 340 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 NAPEPLDQ6IQ20 393 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 CCDC70Q6NSX1 233 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 PCGF5Q86SE9 256 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 SNX19Q92543 992 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 UBXN4Q92575 508 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 RAB7BQ96AH8 199 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 ZC3H10Q96K80 434 aaKnown RBP15.38■□□□□ 0.05
LSM1-203ENST00000520755 SERPINB12Q96P63 405 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 WDR83Q9BRX9 315 aaKnown RBP15.38■□□□□ 0.05
LSM1-203ENST00000520755 ARNT2Q9HBZ2 717 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 FAM114A2Q9NRY5 505 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 GOLGA6AQ9NYA3 693 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 GGT7Q9UJ14 662 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 ANAPC5Q9UJX4 755 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 FADS3Q9Y5Q0 445 aa15.38■□□□□ 0.05
LSM1-203ENST00000520755 MYO15AQ9UKN7 3530 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 MEI4A8MW99 385 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 RNGTTO60942 597 aaKnown RBP15.37■□□□□ 0.05
LSM1-203ENST00000520755 BANF1O75531 89 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 EPOP01588 193 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 FGF1P05230 155 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 HLA-DPA1P20036 260 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 TNFRSF8P28908 595 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 PTGER3P43115 390 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 LMAN1P49257 510 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 PPP2CBP62714 309 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 POLR2LP62875 67 aaKnown RBP15.37■□□□□ 0.05
LSM1-203ENST00000520755 PPP2CAP67775 309 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 NHLH1Q02575 133 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 CALCOCO2Q13137 446 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 KIAA0895LQ68EN5 471 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 SLC41A1Q8IVJ1 513 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 GSPT2Q8IYD1 628 aaKnown RBP15.37■□□□□ 0.05
LSM1-203ENST00000520755 SLC25A41Q8N5S1 370 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 BBOF1Q8ND07 529 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 CADM4Q8NFZ8 388 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 IFT43Q96FT9 208 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 KDM4CQ9H3R0 1056 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 PREBQ9HCU5 417 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 PCDH12Q9NPG4 1184 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 ARIH1Q9Y4X5 557 aaPredicted RBP15.37■□□□□ 0.05
LSM1-203ENST00000520755 SPO11Q9Y5K1 396 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 RALGAPA1Q6GYQ0 2036 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 TRPM6Q9BX84 2022 aa15.37■□□□□ 0.05
LSM1-203ENST00000520755 TP53BP1Q12888 1972 aaPredicted RBP15.36■□□□□ 0.05
LSM1-203ENST00000520755 CACNA1HO95180 2353 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 BPTFQ12830 3046 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 A0A0J9YYE9 177 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 A0A1W2PQ67 120 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 A0A1W2PQU0 124 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 AREL1O15033 823 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 AP1G1O43747 822 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 AVILO75366 819 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 TRBC1P01850 177 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 ALPIP09923 528 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 PIRTP0C851 137 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 CTPS1P17812 591 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 MAT2AP31153 395 aaKnown RBP15.36■□□□□ 0.05
LSM1-203ENST00000520755 GRIA4P48058 902 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 SUOXP51687 545 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 EPHB1P54762 984 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 PLTPP55058 493 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 RPL26P61254 145 aaKnown RBP15.36■□□□□ 0.05
LSM1-203ENST00000520755 VSNL1P62760 191 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 TUBB4BP68371 445 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 FAM193AP78312 1265 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 MSS51Q4VC12 460 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 FNBP1LQ5T0N5 605 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 LYSMD4Q5XG99 296 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 ERAP2Q6P179 960 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 LRRC8BQ6P9F7 803 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 RGL4Q8IZJ4 473 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 ZCCHC9Q8N567 271 aaKnown RBP15.36■□□□□ 0.05
LSM1-203ENST00000520755 RUBCNQ92622 972 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 FOXJ1Q92949 421 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 MCCC1Q96RQ3 725 aaPredicted RBP15.36■□□□□ 0.05
LSM1-203ENST00000520755 PHOX2BQ99453 314 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 PCED1AQ9H1Q7 454 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 SEMA4AQ9H3S1 761 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 PHTF1Q9UMS5 762 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 RPL26L1Q9UNX3 145 aaKnown RBP15.36■□□□□ 0.05
LSM1-203ENST00000520755 PPIL1Q9Y3C6 166 aa15.36■□□□□ 0.05
LSM1-203ENST00000520755 SDK1Q7Z5N4 2213 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 A0A0U1RQS6 177 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 CAPN8A6NHC0 703 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 NPIPB15A6NHN6 443 aaPredicted RBP15.35■□□□□ 0.05
LSM1-203ENST00000520755 METTL12A8MUP2 240 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 A8MX80 341 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 ANKRD66B4E2M5 251 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 SMAPO00193 183 aa15.35■□□□□ 0.05
LSM1-203ENST00000520755 CTIFO43310 598 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms