RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 SERPINC1P01008 464 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 PRB1P04280 392 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 ELFN1P0C7U0 828 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 IL4RP24394 825 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 RBMS1P29558 406 aaKnown RBP12.48□□□□□ -0.41
CSMD1-205ENST00000519623 KIAA1024LP59773 190 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 CCL7P80098 99 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 PIGHQ14442 188 aaPredicted RBP12.48□□□□□ -0.41
CSMD1-205ENST00000519623 SMTNL2Q2TAL5 461 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 PNCKQ6P2M8 343 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 PCSK4Q6UW60 755 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 LSM14AQ8ND56 463 aaKnown RBP12.48□□□□□ -0.41
CSMD1-205ENST00000519623 GPR156Q8NFN8 814 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 OR56A4Q8NGH8 313 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 WDR36Q8NI36 951 aaKnown RBP12.48□□□□□ -0.41
CSMD1-205ENST00000519623 SLC39A7Q92504 469 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 HSPH1Q92598 858 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 SYN2Q92777 582 aaPredicted RBP12.48□□□□□ -0.41
CSMD1-205ENST00000519623 CCDC74AQ96AQ1 378 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 PDXPQ96GD0 296 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 COQ10AQ96MF6 247 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 CSPG4P5Q96PW8 444 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 NUDCD1Q96RS6 583 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 DPH1Q9BZG8 443 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 NOD2Q9HC29 1040 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 FGF22Q9HCT0 170 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 MRPL40Q9NQ50 206 aaKnown RBP12.48□□□□□ -0.41
CSMD1-205ENST00000519623 THSD1Q9NS62 852 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 B4GALT6Q9UBX8 382 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 PCDHGC4Q9Y5F7 938 aa12.48□□□□□ -0.41
CSMD1-205ENST00000519623 HELZ2Q9BYK8 2649 aaKnown RBP12.48□□□□□ -0.41
CSMD1-205ENST00000519623 TEX51A0A1B0GUA7 166 aa12.47□□□□□ -0.41
CSMD1-205ENST00000519623 A0A1W2PQJ5 194 aa12.47□□□□□ -0.41
CSMD1-205ENST00000519623 EIF4E1BA6NMX2 242 aaKnown RBP12.47□□□□□ -0.41
CSMD1-205ENST00000519623 CACNB4O00305 520 aaPredicted RBP12.47□□□□□ -0.41
CSMD1-205ENST00000519623 HSPA9P38646 679 aaKnown RBP12.47□□□□□ -0.41
CSMD1-205ENST00000519623 ARL4AP40617 200 aa12.47□□□□□ -0.41
CSMD1-205ENST00000519623 CXADRP78310 365 aa12.47□□□□□ -0.41
CSMD1-205ENST00000519623 FANCCQ00597 558 aa12.47□□□□□ -0.41
CSMD1-205ENST00000519623 SLC25A11Q02978 314 aaKnown RBP12.47□□□□□ -0.41
CSMD1-205ENST00000519623 SPIDRQ14159 915 aa12.47□□□□□ -0.41
CSMD1-205ENST00000519623 ACOX1Q15067 660 aa12.47□□□□□ -0.41
CSMD1-205ENST00000519623 TMCO3Q6UWJ1 677 aa12.47□□□□□ -0.41
CSMD1-205ENST00000519623 B3GNT8Q7Z7M8 397 aa12.47□□□□□ -0.41
CSMD1-205ENST00000519623 SFTPA2Q8IWL1 248 aa12.47□□□□□ -0.41
CSMD1-205ENST00000519623 NIPA2Q8N8Q9 360 aa12.47□□□□□ -0.41
CSMD1-205ENST00000519623 TEKT4Q8WW24 435 aa12.47□□□□□ -0.41
CSMD1-205ENST00000519623 KCNE4Q8WWG9 221 aa12.47□□□□□ -0.41
CSMD1-205ENST00000519623 BTBD6Q96KE9 485 aa12.47□□□□□ -0.41
CSMD1-205ENST00000519623 MGME1Q9BQP7 344 aa12.47□□□□□ -0.41
CSMD1-205ENST00000519623 TMEM168Q9H0V1 697 aa12.47□□□□□ -0.41
CSMD1-205ENST00000519623 THAP2Q9H0W7 228 aa12.47□□□□□ -0.41
CSMD1-205ENST00000519623 CBX8Q9HC52 389 aa12.47□□□□□ -0.41
CSMD1-205ENST00000519623 PCDH18Q9HCL0 1135 aa12.47□□□□□ -0.41
CSMD1-205ENST00000519623 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.47□□□□□ -0.41
CSMD1-205ENST00000519623 BZW2Q9Y6E2 419 aaKnown RBP12.47□□□□□ -0.41
CSMD1-205ENST00000519623 CFAP46Q8IYW2 2715 aa12.47□□□□□ -0.41
CSMD1-205ENST00000519623 A0A087X0T9 212 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 CCDC187A0A096LP49 1063 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 A0A1W2PQ67 120 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 KLK10O43240 276 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 NOBOXO60393 691 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 SOCS5O75159 536 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 C1QL1O75973 258 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 TNFSF15O95150 251 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 FUCA1P04066 466 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 SERPING1P05155 500 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 CYP1A2P05177 515 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 FAM228BP0C875 321 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 KELP23276 732 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 TRAF2Q12933 501 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 ZNF235Q14590 738 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 PTPRRQ15256 657 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 CNGA3Q16281 694 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 TAF8Q7Z7C8 310 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 CLEC14AQ86T13 490 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 FAM46DQ8NEK8 389 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 OR6C4Q8NGE1 309 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 CCL4L1Q8NHW4 92 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 FAM71BQ8TC56 605 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 LIN37Q96GY3 246 aaPredicted RBP12.46□□□□□ -0.41
CSMD1-205ENST00000519623 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.46□□□□□ -0.41
CSMD1-205ENST00000519623 LRRN3Q9H3W5 708 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 CPNE5Q9HCH3 593 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 CYP4F12Q9HCS2 524 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 IP6K2Q9UHH9 426 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 APPL1Q9UKG1 709 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 PHTF1Q9UMS5 762 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 PPIL1Q9Y3C6 166 aa12.46□□□□□ -0.41
CSMD1-205ENST00000519623 AHCTF1Q8WYP5 2266 aa12.46□□□□□ -0.42
CSMD1-205ENST00000519623 PDE2AO00408 941 aaPredicted RBP12.45□□□□□ -0.42
CSMD1-205ENST00000519623 HEXIM1O94992 359 aaKnown RBP12.45□□□□□ -0.42
CSMD1-205ENST00000519623 RPLP0P05388 317 aaKnown RBP12.45□□□□□ -0.42
CSMD1-205ENST00000519623 CEACAM5P06731 702 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 PNLIPP16233 465 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 GLB1P16278 677 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 LHCGRP22888 699 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 VIPR1P32241 457 aa12.45□□□□□ -0.42
CSMD1-205ENST00000519623 MLLT3P42568 568 aaPredicted RBP12.45□□□□□ -0.42
CSMD1-205ENST00000519623 ARSEP51690 589 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms