RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 MKKSQ9NPJ1 570 aaPredicted RBP3.77□□□□□ -1.81
VPS13B-207ENST00000518569 DIAPH3Q9NSV4 1193 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 DLGAP2Q9P1A6 1054 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 ABI3Q9P2A4 366 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 LIMA1Q9UHB6 759 aaKnown RBP3.77□□□□□ -1.81
VPS13B-207ENST00000518569 FBXO9Q9UK97 447 aaPredicted RBP3.77□□□□□ -1.81
VPS13B-207ENST00000518569 PSAT1Q9Y617 370 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 STON1Q9Y6Q2 735 aa3.77□□□□□ -1.81
VPS13B-207ENST00000518569 RUSC2Q8N2Y8 1516 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 CPED1A4D0V7 1026 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 PI4KAP2A4QPH2 592 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 PGPEP1LA6NFU8 196 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 TIMM23O14925 209 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 PRSS2P07478 247 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 MAOAP21397 527 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 C21orf33P30042 268 aaPredicted RBP3.76□□□□□ -1.81
VPS13B-207ENST00000518569 HNRNPH1P31943 449 aaKnown RBP3.76□□□□□ -1.81
VPS13B-207ENST00000518569 PCYT1AP49585 367 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 HTR6P50406 440 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 METAP2P50579 478 aaKnown RBP eCLIP3.76□□□□□ -1.81
VPS13B-207ENST00000518569 GOLGA8DPQ0D2H9 430 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 CSTF3Q12996 717 aaKnown RBP3.76□□□□□ -1.81
VPS13B-207ENST00000518569 SIM2Q14190 667 aaPredicted RBP3.76□□□□□ -1.81
VPS13B-207ENST00000518569 EIF4A2Q14240 407 aaKnown RBP3.76□□□□□ -1.81
VPS13B-207ENST00000518569 KRT32Q14532 448 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 DRAP1Q14919 205 aaPredicted RBP3.76□□□□□ -1.81
VPS13B-207ENST00000518569 ALG11Q2TAA5 492 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 HAUS3Q68CZ6 603 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 TYW3Q6IPR3 259 aaKnown RBP3.76□□□□□ -1.81
VPS13B-207ENST00000518569 METTL2BQ6P1Q9 378 aaKnown RBP3.76□□□□□ -1.81
VPS13B-207ENST00000518569 FBXO46Q6PJ61 603 aaPredicted RBP3.76□□□□□ -1.81
VPS13B-207ENST00000518569 LCTLQ6UWM7 567 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 MTSS1LQ765P7 747 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.76□□□□□ -1.81
VPS13B-207ENST00000518569 PXKQ7Z7A4 578 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 ZBTB2Q8N680 514 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 TMEM116Q8NCL8 245 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 KCNG4Q8TDN1 519 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 SGCDQ92629 289 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 ARHGEF2Q92974 986 aaKnown RBP3.76□□□□□ -1.81
VPS13B-207ENST00000518569 ERGIC1Q969X5 290 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 METTL2AQ96IZ6 378 aaKnown RBP3.76□□□□□ -1.81
VPS13B-207ENST00000518569 TXNDC15Q96J42 360 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 MARK4Q96L34 752 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 TMEM68Q96MH6 324 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 SEZ6LQ9BYH1 1024 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 TKTL2Q9H0I9 626 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 ESRP2Q9H6T0 727 aaKnown RBP3.76□□□□□ -1.81
VPS13B-207ENST00000518569 SCPEP1Q9HB40 452 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 FBRSL1Q9HCM7 1045 aaKnown RBP3.76□□□□□ -1.81
VPS13B-207ENST00000518569 EHD2Q9NZN4 543 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 SLCO3A1Q9UIG8 710 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 MKLN1Q9UL63 735 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 ERVK-11Q9UQG0 969 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 KCNE2Q9Y6J6 123 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 CEPT1Q9Y6K0 416 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 PIAS3Q9Y6X2 628 aa3.76□□□□□ -1.81
VPS13B-207ENST00000518569 ATXN2Q99700 1313 aaKnown RBP3.75□□□□□ -1.81
VPS13B-207ENST00000518569 A0A0U1RQG5 324 aaPredicted RBP3.75□□□□□ -1.81
VPS13B-207ENST00000518569 FAM237AA0A1B0GTK4 181 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 A0A1W2PQF6 199 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 IFNL4K9M1U5 179 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 KCNJ13O60928 360 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 RNASEH2AO75792 299 aaKnown RBP3.75□□□□□ -1.81
VPS13B-207ENST00000518569 CH25HO95992 272 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 EIF2S1P05198 315 aaKnown RBP3.75□□□□□ -1.81
VPS13B-207ENST00000518569 ZNF182P17025 639 aaPredicted RBP3.75□□□□□ -1.81
VPS13B-207ENST00000518569 HOXA11P31270 313 aaPredicted RBP3.75□□□□□ -1.81
VPS13B-207ENST00000518569 ARL3P36405 182 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 PIGAP37287 484 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 COMPP49747 757 aaPredicted RBP3.75□□□□□ -1.81
VPS13B-207ENST00000518569 EIF5P55010 431 aaKnown RBP3.75□□□□□ -1.81
VPS13B-207ENST00000518569 NANOS2P60321 138 aaKnown RBP3.75□□□□□ -1.81
VPS13B-207ENST00000518569 SEC61A1P61619 476 aaKnown RBP3.75□□□□□ -1.81
VPS13B-207ENST00000518569 LTBQ06643 244 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 NIPAL4Q0D2K0 466 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 MAMLD1Q13495 774 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 NAE1Q13564 534 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 ERV3-1Q14264 604 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 SOWAHCQ53LP3 525 aaPredicted RBP3.75□□□□□ -1.81
VPS13B-207ENST00000518569 HYIQ5T013 277 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 SNX30Q5VWJ9 437 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 ANKRD54Q6NXT1 300 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 NCEH1Q6PIU2 408 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 TMED8Q6PL24 325 aaPredicted RBP3.75□□□□□ -1.81
VPS13B-207ENST00000518569 TSSK4Q6SA08 328 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 ZNF517Q6ZMY9 492 aaPredicted RBP3.75□□□□□ -1.81
VPS13B-207ENST00000518569 C4orf50Q6ZRC1 276 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 ARHGAP12Q8IWW6 846 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 C9orf106Q8NAJ2 232 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 MMABQ96EY8 250 aaPredicted RBP3.75□□□□□ -1.81
VPS13B-207ENST00000518569 PERPQ96FX8 193 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 ZNF479Q96JC4 524 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 TREX2Q9BQ50 279 aaPredicted RBP3.75□□□□□ -1.81
VPS13B-207ENST00000518569 TMEM47Q9BQJ4 181 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 IFIH1Q9BYX4 1025 aaKnown RBP3.75□□□□□ -1.81
VPS13B-207ENST00000518569 KIF9Q9HAQ2 790 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 SELENONQ9NZV5 590 aa3.75□□□□□ -1.81
VPS13B-207ENST00000518569 IGLV5-52A0A0A0MRZ9 124 aa3.74□□□□□ -1.81
VPS13B-207ENST00000518569 LIPT2A6NK58 231 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms