RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 ADNPQ9H2P0 1102 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 GTSE1Q9NYZ3 720 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 COL20A1Q9P218 1284 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 PCDHGB1Q9Y5G3 927 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 M0QYV0 167 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 CRYZL1O95825 349 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 PSAPP07602 524 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 IMPDH1P20839 514 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 SDC4P31431 198 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 EIF2DP41214 584 aaKnown RBP12.85□□□□□ -0.35
SMAD1-215ENST00000515385 TUFMP49411 452 aaKnown RBP12.85□□□□□ -0.35
SMAD1-215ENST00000515385 C19orf57Q0VDD7 668 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 GALNT1Q10472 559 aaPredicted RBP12.85□□□□□ -0.35
SMAD1-215ENST00000515385 CDO1Q16878 200 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 C6orf141Q5SZD1 244 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 BSPRYQ5W0U4 402 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 OR6B2Q6IFH4 312 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 TRNP1Q6NT89 227 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 ZNF598Q86UK7 904 aaKnown RBP12.85□□□□□ -0.35
SMAD1-215ENST00000515385 PTRH1Q86Y79 214 aaKnown RBP12.85□□□□□ -0.35
SMAD1-215ENST00000515385 LGI2Q8N0V4 545 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 Q8N9G6 341 aaPredicted RBP12.85□□□□□ -0.35
SMAD1-215ENST00000515385 OR13J1Q8NGT2 312 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 DPF3Q92784 378 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 BCO2Q9BYV7 579 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 C12orf10Q9HB07 376 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 PAK1IP1Q9NWT1 392 aaPredicted RBP12.85□□□□□ -0.35
SMAD1-215ENST00000515385 FBXO40Q9UH90 709 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 DSEQ9UL01 958 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 SLC39A10Q9ULF5 831 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 HES2Q9Y543 173 aa12.85□□□□□ -0.35
SMAD1-215ENST00000515385 ZCWPW2A0A1B0GU75 182 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 SEC24AO95486 1093 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 TNNC2P02585 160 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 ABCB1P08183 1280 aaPredicted RBP12.84□□□□□ -0.35
SMAD1-215ENST00000515385 THRBP10828 461 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 ATP5F1P24539 256 aaPredicted RBP12.84□□□□□ -0.35
SMAD1-215ENST00000515385 SHMT2P34897 504 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 CLCQ05315 142 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 DAG1Q14118 895 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 CA9Q16790 459 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.84□□□□□ -0.35
SMAD1-215ENST00000515385 RSBN1Q5VWQ0 802 aaPredicted RBP12.84□□□□□ -0.35
SMAD1-215ENST00000515385 XRRA1Q6P2D8 792 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 ZPBP2Q6X784 338 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 CCDC81Q6ZN84 652 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 LYSMD2Q8IV50 215 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 SIX5Q8N196 739 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 AFG1LQ8WV93 481 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 CDK5RAP1Q96SZ6 601 aaKnown RBP12.84□□□□□ -0.35
SMAD1-215ENST00000515385 XYLT2Q9H1B5 865 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 RHOJQ9H4E5 214 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 NGRNQ9NPE2 291 aaKnown RBP12.84□□□□□ -0.35
SMAD1-215ENST00000515385 ACOT9Q9Y305 439 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 PCDHGA3Q9Y5H0 932 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 TCRBV5S2A0A599 114 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 TMEM233B4DJY2 109 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 H0Y858 1186 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 RAD51BO15315 384 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 B4GAT1O43505 415 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 TBC1D4O60343 1298 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 TSPAN1O60635 241 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 KATNA1O75449 491 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 DAB1O75553 588 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 CHRNA1P02708 482 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 FOSL1P15407 271 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 PRKCAP17252 672 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 HDCP19113 662 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 M6PRP20645 277 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 OXTRP30559 389 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 GLUD2P49448 558 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 IST1P53990 364 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 ARSFP54793 590 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 IFRD2Q12894 506 aaPredicted RBP12.84□□□□□ -0.35
SMAD1-215ENST00000515385 USP10Q14694 798 aaKnown RBP12.84□□□□□ -0.35
SMAD1-215ENST00000515385 COL19A1Q14993 1142 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 CRY1Q16526 586 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 CES3Q6UWW8 571 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 MAMSTRQ6ZN01 415 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 FAM183BPQ6ZVS7 135 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 SLC26A9Q7LBE3 791 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 KCNMB4Q86W47 210 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 SNX29P2Q8IUI4 249 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 GRPEL2Q8TAA5 225 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 DYNC2LI1Q8TCX1 351 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 SLC22A17Q8WUG5 538 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 MOCOSQ96EN8 888 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 TMEM176AQ96HP8 235 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 AGAP2Q99490 1192 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 MRPL57Q9BQC6 102 aaKnown RBP12.84□□□□□ -0.35
SMAD1-215ENST00000515385 TRIM54Q9BYV2 358 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 AS3MTQ9HBK9 375 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 TLR9Q9NR96 1032 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 DTLQ9NZJ0 730 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 ZNF221Q9UK13 617 aa12.84□□□□□ -0.35
SMAD1-215ENST00000515385 UBXN8O00124 270 aa12.83□□□□□ -0.36
SMAD1-215ENST00000515385 TOR1BO14657 336 aa12.83□□□□□ -0.36
SMAD1-215ENST00000515385 INPP4BO15327 924 aa12.83□□□□□ -0.36
SMAD1-215ENST00000515385 CCNKO75909 580 aa12.83□□□□□ -0.36
SMAD1-215ENST00000515385 DLGAP3O95886 979 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms